RNA–Protein interactions for RNA: ENST00000586751.5

LAMA3-206, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-206ENST00000586751 KAZALD1Q96I82 304 aa10.88□□□□□ -0.67
LAMA3-206ENST00000586751 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
LAMA3-206ENST00000586751 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
LAMA3-206ENST00000586751 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
LAMA3-206ENST00000586751 AK2P54819 239 aa10.87□□□□□ -0.67
LAMA3-206ENST00000586751 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
LAMA3-206ENST00000586751 JARID2Q92833 1246 aaPredicted RBP10.87□□□□□ -0.67
LAMA3-206ENST00000586751 NOL7Q9UMY1 257 aaKnown RBP10.87□□□□□ -0.67
LAMA3-206ENST00000586751 CNPY2Q9Y2B0 182 aa10.87□□□□□ -0.67
LAMA3-206ENST00000586751 RAD50Q92878 1312 aa10.87□□□□□ -0.67
LAMA3-206ENST00000586751 LMO7Q8WWI1 1683 aa10.86□□□□□ -0.67
LAMA3-206ENST00000586751 ANAPC15P60006 121 aa10.86□□□□□ -0.67
LAMA3-206ENST00000586751 CWC27Q6UX04 472 aaKnown RBP10.86□□□□□ -0.67
LAMA3-206ENST00000586751 KCNG1Q9UIX4 513 aa10.86□□□□□ -0.67
LAMA3-206ENST00000586751 OFD1O75665 1012 aa10.86□□□□□ -0.67
LAMA3-206ENST00000586751 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
LAMA3-206ENST00000586751 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
LAMA3-206ENST00000586751 CWF19L2Q2TBE0 894 aaKnown RBP10.86□□□□□ -0.67
LAMA3-206ENST00000586751 AP5Z1O43299 807 aa10.85□□□□□ -0.67
LAMA3-206ENST00000586751 CHGBP05060 677 aa10.85□□□□□ -0.67
LAMA3-206ENST00000586751 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
LAMA3-206ENST00000586751 TLR7Q9NYK1 1049 aaKnown RBP10.85□□□□□ -0.67
LAMA3-206ENST00000586751 EID1Q9Y6B2 187 aa10.85□□□□□ -0.67
LAMA3-206ENST00000586751 AOX1Q06278 1338 aa10.85□□□□□ -0.67
LAMA3-206ENST00000586751 FER1L4A9Z1Z3 1794 aa10.85□□□□□ -0.67
LAMA3-206ENST00000586751 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
LAMA3-206ENST00000586751 IGSF3O75054 1194 aa10.84□□□□□ -0.67
LAMA3-206ENST00000586751 DNAAF4Q8WXU2 420 aa10.84□□□□□ -0.67
LAMA3-206ENST00000586751 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
LAMA3-206ENST00000586751 AXIN2Q9Y2T1 843 aa10.84□□□□□ -0.67
LAMA3-206ENST00000586751 SYT1P21579 422 aa10.83□□□□□ -0.67
LAMA3-206ENST00000586751 IP6K1Q92551 441 aa10.83□□□□□ -0.67
LAMA3-206ENST00000586751 HYPKQ9NX55 129 aa10.83□□□□□ -0.67
LAMA3-206ENST00000586751 SIPA1L3O60292 1781 aaPredicted RBP10.83□□□□□ -0.67
LAMA3-206ENST00000586751 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
LAMA3-206ENST00000586751 KLHDC4Q8TBB5 520 aa10.83□□□□□ -0.68
LAMA3-206ENST00000586751 RGPD5Q99666 1765 aa10.83□□□□□ -0.68
LAMA3-206ENST00000586751 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
LAMA3-206ENST00000586751 ZBTB7CA1YPR0 619 aa10.83□□□□□ -0.68
LAMA3-206ENST00000586751 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
LAMA3-206ENST00000586751 SASH1O94885 1247 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 C17orf53Q8N3J3 647 aaPredicted RBP10.82□□□□□ -0.68
LAMA3-206ENST00000586751 HEG1Q9ULI3 1381 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 C5P01031 1676 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 ZKSCAN5Q9Y2L8 839 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 CHD2O14647 1828 aaKnown RBP10.82□□□□□ -0.68
LAMA3-206ENST00000586751 COL15A1P39059 1388 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 MCM2P49736 904 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 PDIA6Q15084 440 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 MAP3K2Q9Y2U5 619 aa10.82□□□□□ -0.68
LAMA3-206ENST00000586751 NECAB1Q8N987 351 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 KIF1BPQ96EK5 621 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 BTBD11A6QL63 1104 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 CASTP20810 708 aaKnown RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 TCEANC2Q96MN5 208 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 GIGYF1O75420 1035 aaPredicted RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 ME3Q16798 604 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 FAM173BQ6P4H8 233 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 EAF2Q96CJ1 260 aaPredicted RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 EDC3Q96F86 508 aaKnown RBP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 FUCA2Q9BTY2 467 aa10.81□□□□□ -0.68
LAMA3-206ENST00000586751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.81□□□□□ -0.68
LAMA3-206ENST00000586751 PHRF1Q9P1Y6 1649 aaKnown RBP10.8□□□□□ -0.68
LAMA3-206ENST00000586751 ZSCAN22P10073 491 aaPredicted RBP10.8□□□□□ -0.68
LAMA3-206ENST00000586751 MCCP23508 829 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 MTX1Q13505 466 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 HS1BP3Q53T59 392 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 NDUFB9Q9Y6M9 179 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 NECTIN1Q15223 517 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 EPHA10Q5JZY3 1008 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
LAMA3-206ENST00000586751 MBD3O95983 291 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 DNM1Q05193 864 aaKnown RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 TPCN1Q9ULQ1 816 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 NPHP4O75161 1426 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 NCAPD2Q15021 1401 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 STX6O43752 255 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 KCNB2Q92953 911 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 A0A0D9SFI3 127 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 MSNP26038 577 aaKnown RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
LAMA3-206ENST00000586751 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
LAMA3-206ENST00000586751 F13A1P00488 732 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms