RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
SF3A2-202ENST00000586396 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
SF3A2-202ENST00000586396 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
SF3A2-202ENST00000586396 STYK1Q6J9G0 422 aa20.15■□□□□ 0.82
SF3A2-202ENST00000586396 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
SF3A2-202ENST00000586396 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
SF3A2-202ENST00000586396 IQCA1LA6NCM1 817 aa20.14■□□□□ 0.81
SF3A2-202ENST00000586396 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
SF3A2-202ENST00000586396 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
SF3A2-202ENST00000586396 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
SF3A2-202ENST00000586396 SRGNP10124 158 aa20.13■□□□□ 0.81
SF3A2-202ENST00000586396 MASTLQ96GX5 879 aa20.13■□□□□ 0.81
SF3A2-202ENST00000586396 A1BGP04217 495 aa20.12■□□□□ 0.81
SF3A2-202ENST00000586396 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
SF3A2-202ENST00000586396 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
SF3A2-202ENST00000586396 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
SF3A2-202ENST00000586396 ADAMTSL1Q8N6G6 1762 aa20.11■□□□□ 0.81
SF3A2-202ENST00000586396 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
SF3A2-202ENST00000586396 PASKQ96RG2 1323 aa20.1■□□□□ 0.81
SF3A2-202ENST00000586396 FOXN1O15353 648 aa20.1■□□□□ 0.81
SF3A2-202ENST00000586396 CCDC93Q567U6 631 aa20.1■□□□□ 0.81
SF3A2-202ENST00000586396 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
SF3A2-202ENST00000586396 NBPF5PQ86XG9 351 aaPredicted RBP20.09■□□□□ 0.81
SF3A2-202ENST00000586396 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
SF3A2-202ENST00000586396 BTBD11A6QL63 1104 aa20.08■□□□□ 0.81
SF3A2-202ENST00000586396 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-202ENST00000586396 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-202ENST00000586396 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
SF3A2-202ENST00000586396 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
SF3A2-202ENST00000586396 LAMB4A4D0S4 1761 aa20.07■□□□□ 0.8
SF3A2-202ENST00000586396 ZNF541Q9H0D2 1346 aa20.06■□□□□ 0.8
SF3A2-202ENST00000586396 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
SF3A2-202ENST00000586396 NPR1P16066 1061 aa20.06■□□□□ 0.8
SF3A2-202ENST00000586396 FKBP4Q02790 459 aaKnown RBP eCLIP20.06■□□□□ 0.8
SF3A2-202ENST00000586396 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
SF3A2-202ENST00000586396 PRDM10Q9NQV6 1147 aa20.06■□□□□ 0.8
SF3A2-202ENST00000586396 CLEC4GQ6UXB4 293 aa20.05■□□□□ 0.8
SF3A2-202ENST00000586396 ZNF277Q9NRM2 450 aaPredicted RBP20.05■□□□□ 0.8
SF3A2-202ENST00000586396 KCNQ3O43525 872 aa20.04■□□□□ 0.8
SF3A2-202ENST00000586396 CTCFP49711 727 aaPredicted RBP20.04■□□□□ 0.8
SF3A2-202ENST00000586396 VEGFBP49765 207 aa20.04■□□□□ 0.8
SF3A2-202ENST00000586396 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
SF3A2-202ENST00000586396 HACL1Q9UJ83 578 aa20.04■□□□□ 0.8
SF3A2-202ENST00000586396 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
SF3A2-202ENST00000586396 PPP2R1AP30153 589 aa20.03■□□□□ 0.8
SF3A2-202ENST00000586396 USP16Q9Y5T5 823 aa20.03■□□□□ 0.8
SF3A2-202ENST00000586396 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.8
SF3A2-202ENST00000586396 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
SF3A2-202ENST00000586396 EPHX2P34913 555 aa20.02■□□□□ 0.8
SF3A2-202ENST00000586396 NIP7Q9Y221 180 aaKnown RBP eCLIP20.02■□□□□ 0.8
SF3A2-202ENST00000586396 PRAMEF22A3QJZ6 481 aa20.01■□□□□ 0.79
SF3A2-202ENST00000586396 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
SF3A2-202ENST00000586396 OLFM4Q6UX06 510 aa20.01■□□□□ 0.79
SF3A2-202ENST00000586396 TPTE2Q6XPS3 522 aa20.01■□□□□ 0.79
SF3A2-202ENST00000586396 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
SF3A2-202ENST00000586396 KLRG2A4D1S0 409 aaPredicted RBP20■□□□□ 0.79
SF3A2-202ENST00000586396 FAM177BA6PVY3 158 aa20■□□□□ 0.79
SF3A2-202ENST00000586396 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
SF3A2-202ENST00000586396 PNMA8AQ86V59 439 aaPredicted RBP20■□□□□ 0.79
SF3A2-202ENST00000586396 PHACTR3Q96KR7 559 aa20■□□□□ 0.79
SF3A2-202ENST00000586396 CFAP53Q96M91 514 aa20■□□□□ 0.79
SF3A2-202ENST00000586396 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
SF3A2-202ENST00000586396 THSD7BQ9C0I4 1608 aa20■□□□□ 0.79
SF3A2-202ENST00000586396 IARSP41252 1262 aaKnown RBP19.99■□□□□ 0.79
SF3A2-202ENST00000586396 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
SF3A2-202ENST00000586396 NUP98P52948 1817 aa19.98■□□□□ 0.79
SF3A2-202ENST00000586396 LBX1P52954 281 aa19.98■□□□□ 0.79
SF3A2-202ENST00000586396 MAP1SQ66K74 1059 aaPredicted RBP19.98■□□□□ 0.79
SF3A2-202ENST00000586396 WBP1LQ9NX94 342 aa19.98■□□□□ 0.79
SF3A2-202ENST00000586396 RASSF10A6NK89 507 aa19.97■□□□□ 0.79
SF3A2-202ENST00000586396 RGL2O15211 777 aa19.97■□□□□ 0.79
SF3A2-202ENST00000586396 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
SF3A2-202ENST00000586396 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
SF3A2-202ENST00000586396 MCM10Q7L590 875 aa19.97■□□□□ 0.79
SF3A2-202ENST00000586396 GPC2Q8N158 579 aa19.97■□□□□ 0.79
SF3A2-202ENST00000586396 LTBP1Q14766 1721 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 FZD9O00144 591 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 CNTROBQ8N137 903 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
SF3A2-202ENST00000586396 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
SF3A2-202ENST00000586396 COL4A5P29400 1685 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 NBPF26B4DH59 902 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 DEFB115Q30KQ5 88 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 NBPF10Q6P3W6 841 aaKnown RBP19.95■□□□□ 0.78
SF3A2-202ENST00000586396 SYNE4Q8N205 404 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 NBPF15Q8N660 670 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 JDP2Q8WYK2 163 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 ABCC12Q96J65 1359 aa19.95■□□□□ 0.78
SF3A2-202ENST00000586396 PSMD1Q99460 953 aa19.94■□□□□ 0.78
SF3A2-202ENST00000586396 HSPA8P11142 646 aaKnown RBP19.93■□□□□ 0.78
SF3A2-202ENST00000586396 MAP2K1Q02750 393 aaPredicted RBP19.93■□□□□ 0.78
SF3A2-202ENST00000586396 HLFQ16534 295 aa19.93■□□□□ 0.78
SF3A2-202ENST00000586396 GJA3Q9Y6H8 435 aa19.93■□□□□ 0.78
SF3A2-202ENST00000586396 DLG5Q8TDM6 1919 aa19.93■□□□□ 0.78
SF3A2-202ENST00000586396 WDR33Q9C0J8 1336 aaKnown RBP19.93■□□□□ 0.78
SF3A2-202ENST00000586396 LMOD1P29536 600 aaPredicted RBP19.92■□□□□ 0.78
SF3A2-202ENST00000586396 EIF6P56537 245 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms