RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
TIMP2-204ENST00000586057 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
TIMP2-204ENST00000586057 XIRP1Q702N8 1843 aaKnown RBP12.44□□□□□ -0.42
TIMP2-204ENST00000586057 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
TIMP2-204ENST00000586057 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 TEX2Q8IWB9 1127 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
TIMP2-204ENST00000586057 KAT6BQ8WYB5 2073 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
TIMP2-204ENST00000586057 MEGF6O75095 1541 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
TIMP2-204ENST00000586057 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
TIMP2-204ENST00000586057 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
TIMP2-204ENST00000586057 ABCC4O15439 1325 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 TOM1O60784 492 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 IL2RBP14784 551 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
TIMP2-204ENST00000586057 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 OGFRQ9NZT2 677 aa12.42□□□□□ -0.42
TIMP2-204ENST00000586057 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 ALS2Q96Q42 1657 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 PI4KAP2A4QPH2 592 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 PI4KAP1Q8N8J0 262 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
TIMP2-204ENST00000586057 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
TIMP2-204ENST00000586057 PTPRCP08575 1304 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 NUCB2P80303 420 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
TIMP2-204ENST00000586057 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
TIMP2-204ENST00000586057 RNF214Q8ND24 703 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
TIMP2-204ENST00000586057 CPDO75976 1380 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
TIMP2-204ENST00000586057 SYCE3A1L190 88 aa12.39□□□□□ -0.43
TIMP2-204ENST00000586057 INTS3Q68E01 1043 aaKnown RBP12.39□□□□□ -0.43
TIMP2-204ENST00000586057 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
TIMP2-204ENST00000586057 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
TIMP2-204ENST00000586057 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
TIMP2-204ENST00000586057 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
TIMP2-204ENST00000586057 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
TIMP2-204ENST00000586057 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
TIMP2-204ENST00000586057 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
TIMP2-204ENST00000586057 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
TIMP2-204ENST00000586057 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
TIMP2-204ENST00000586057 KIF2CQ99661 725 aa12.38□□□□□ -0.43
TIMP2-204ENST00000586057 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
TIMP2-204ENST00000586057 HDAC1Q13547 482 aaPredicted RBP12.37□□□□□ -0.43
TIMP2-204ENST00000586057 RGS22Q8NE09 1264 aa12.37□□□□□ -0.43
TIMP2-204ENST00000586057 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
TIMP2-204ENST00000586057 DBF4Q9UBU7 674 aaPredicted RBP12.37□□□□□ -0.43
TIMP2-204ENST00000586057 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
TIMP2-204ENST00000586057 USP54Q70EL1 1684 aa12.37□□□□□ -0.43
TIMP2-204ENST00000586057 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 TMEM63CQ9P1W3 806 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
TIMP2-204ENST00000586057 COL5A2P05997 1499 aaPredicted RBP12.36□□□□□ -0.43
TIMP2-204ENST00000586057 RIC3Q7Z5B4 369 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 SPTLC3Q9NUV7 552 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
TIMP2-204ENST00000586057 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
TIMP2-204ENST00000586057 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 CALCOCO1Q9P1Z2 691 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 UBTFL1P0CB47 393 aaPredicted RBP12.35□□□□□ -0.43
TIMP2-204ENST00000586057 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
TIMP2-204ENST00000586057 PHRF1Q9P1Y6 1649 aaKnown RBP12.35□□□□□ -0.43
TIMP2-204ENST00000586057 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
TIMP2-204ENST00000586057 GNAI2P04899 355 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
TIMP2-204ENST00000586057 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
TIMP2-204ENST00000586057 MPNDQ8N594 471 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 TSPYL1Q9H0U9 437 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 EXOC5O00471 708 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 TSPY26PQ9H489 355 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 TMOD3Q9NYL9 352 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
TIMP2-204ENST00000586057 RGS12O14924 1447 aa12.34□□□□□ -0.43
TIMP2-204ENST00000586057 SNRPA1P09661 255 aaKnown RBP12.33□□□□□ -0.43
TIMP2-204ENST00000586057 CERS3Q8IU89 383 aa12.33□□□□□ -0.43
TIMP2-204ENST00000586057 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms