RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 PRDM6Q9NQX0 595 aa9.63□□□□□ -0.87
RPRD1A-203ENST00000585879 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
RPRD1A-203ENST00000585879 SKIP12755 728 aa9.62□□□□□ -0.87
RPRD1A-203ENST00000585879 NKAPLQ5M9Q1 402 aa9.62□□□□□ -0.87
RPRD1A-203ENST00000585879 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
RPRD1A-203ENST00000585879 SFSWAPQ12872 951 aaKnown RBP9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 NCOA4Q13772 614 aa9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 SLC9A9Q8IVB4 645 aa9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
RPRD1A-203ENST00000585879 M0R082 166 aa9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 ZNF417Q8TAU3 575 aa9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 ZNF587Q96SQ5 575 aaPredicted RBP9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
RPRD1A-203ENST00000585879 PSME1Q06323 249 aa9.59□□□□□ -0.87
RPRD1A-203ENST00000585879 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
RPRD1A-203ENST00000585879 SH3PXD2AQ5TCZ1 1133 aa9.59□□□□□ -0.87
RPRD1A-203ENST00000585879 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
RPRD1A-203ENST00000585879 ALBP02768 609 aa9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 MICALL1Q8N3F8 863 aa9.58□□□□□ -0.88
RPRD1A-203ENST00000585879 SERTM1A2A2V5 107 aa9.57□□□□□ -0.88
RPRD1A-203ENST00000585879 NID1P14543 1247 aa9.57□□□□□ -0.88
RPRD1A-203ENST00000585879 ZNF232Q9UNY5 417 aa9.57□□□□□ -0.88
RPRD1A-203ENST00000585879 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 APBA3O96018 575 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 C8orf86Q6ZUL3 223 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
RPRD1A-203ENST00000585879 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 ADH7P40394 386 aa9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 KCNQ4P56696 695 aa9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 C1orf53Q5VUE5 145 aa9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 RHPN1Q8TCX5 695 aa9.55□□□□□ -0.88
RPRD1A-203ENST00000585879 DYRK3O43781 588 aa9.54□□□□□ -0.88
RPRD1A-203ENST00000585879 HIRAP54198 1017 aaPredicted RBP9.54□□□□□ -0.88
RPRD1A-203ENST00000585879 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
RPRD1A-203ENST00000585879 PSMA6P60900 246 aaKnown RBP9.53□□□□□ -0.88
RPRD1A-203ENST00000585879 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
RPRD1A-203ENST00000585879 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
RPRD1A-203ENST00000585879 NACC1Q96RE7 527 aa9.53□□□□□ -0.88
RPRD1A-203ENST00000585879 BRD7Q9NPI1 651 aa9.53□□□□□ -0.88
RPRD1A-203ENST00000585879 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 GRIK4Q16099 956 aa9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 HSH2DQ96JZ2 352 aa9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 TSPAN10Q9H1Z9 355 aaPredicted RBP9.52□□□□□ -0.89
RPRD1A-203ENST00000585879 TYRO3Q06418 890 aa9.51□□□□□ -0.89
RPRD1A-203ENST00000585879 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
RPRD1A-203ENST00000585879 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
RPRD1A-203ENST00000585879 CEP63Q96MT8 703 aa9.51□□□□□ -0.89
RPRD1A-203ENST00000585879 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 CLDN10P78369 228 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 CCDC102BQ68D86 513 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
RPRD1A-203ENST00000585879 M0R2N6 131 aa9.49□□□□□ -0.89
RPRD1A-203ENST00000585879 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
RPRD1A-203ENST00000585879 ADAMTS19Q8TE59 1207 aa9.49□□□□□ -0.89
RPRD1A-203ENST00000585879 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
RPRD1A-203ENST00000585879 SFI1A8K8P3 1242 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 ADGRE1Q14246 886 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 PRSS36Q5K4E3 855 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 SUSD3Q96L08 255 aa9.48□□□□□ -0.89
RPRD1A-203ENST00000585879 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 C9orf172C9J069 976 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 SELPP16109 830 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
RPRD1A-203ENST00000585879 LILRB5O75023 590 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 UCN2Q96RP3 112 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
RPRD1A-203ENST00000585879 C21orf2O43822 256 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 DKK1O94907 266 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 H2AFB2P0C5Z0 115 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
RPRD1A-203ENST00000585879 BHMTQ93088 406 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms