RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 XAGE3Q8WTP9 111 aa27.66■■■□□ 2.02
RETREG3-202ENST00000585726 TBC1D9BQ66K14 1250 aa27.65■■■□□ 2.02
RETREG3-202ENST00000585726 COPS6Q7L5N1 327 aa27.65■■■□□ 2.02
RETREG3-202ENST00000585726 FHDC1Q9C0D6 1143 aaPredicted RBP27.65■■■□□ 2.02
RETREG3-202ENST00000585726 ZBTB3Q9H5J0 574 aa27.65■■■□□ 2.02
RETREG3-202ENST00000585726 TM4SF1P30408 202 aa27.64■■■□□ 2.02
RETREG3-202ENST00000585726 DDR1Q08345 913 aa27.64■■■□□ 2.02
RETREG3-202ENST00000585726 HLFQ16534 295 aa27.64■■■□□ 2.02
RETREG3-202ENST00000585726 CHMP4AQ9BY43 222 aa27.63■■■□□ 2.01
RETREG3-202ENST00000585726 ZNF652Q9Y2D9 606 aa27.63■■■□□ 2.01
RETREG3-202ENST00000585726 SRCAPQ6ZRS2 3230 aa27.63■■■□□ 2.01
RETREG3-202ENST00000585726 MAP3K15Q6ZN16 1313 aa27.63■■■□□ 2.01
RETREG3-202ENST00000585726 SCN7AQ01118 1682 aa27.62■■■□□ 2.01
RETREG3-202ENST00000585726 VAMP4O75379 141 aa27.62■■■□□ 2.01
RETREG3-202ENST00000585726 HYPKQ9NX55 129 aa27.62■■■□□ 2.01
RETREG3-202ENST00000585726 POLRMTO00411 1230 aaKnown RBP27.61■■■□□ 2.01
RETREG3-202ENST00000585726 STK31Q9BXU1 1019 aa27.61■■■□□ 2.01
RETREG3-202ENST00000585726 BCORQ6W2J9 1755 aa27.59■■■□□ 2.01
RETREG3-202ENST00000585726 ERVV-1B6SEH8 477 aa27.59■■■□□ 2.01
RETREG3-202ENST00000585726 CLEC4GQ6UXB4 293 aa27.59■■■□□ 2.01
RETREG3-202ENST00000585726 SETDB2Q96T68 719 aa27.59■■■□□ 2.01
RETREG3-202ENST00000585726 PHAXQ9H814 394 aaKnown RBP27.59■■■□□ 2.01
RETREG3-202ENST00000585726 SERPINB2P05120 415 aa27.58■■■□□ 2.01
RETREG3-202ENST00000585726 SYT17Q9BSW7 474 aa27.58■■■□□ 2.01
RETREG3-202ENST00000585726 NIP7Q9Y221 180 aaKnown RBP eCLIP27.57■■■□□ 2
RETREG3-202ENST00000585726 SLC4A2P04920 1241 aa27.56■■■□□ 2
RETREG3-202ENST00000585726 FAM177BA6PVY3 158 aa27.55■■■□□ 2
RETREG3-202ENST00000585726 TRMT2AQ8IZ69 625 aaKnown RBP27.55■■■□□ 2
RETREG3-202ENST00000585726 NPHP1O15259 732 aa27.54■■■□□ 2
RETREG3-202ENST00000585726 GPTP24298 496 aa27.54■■■□□ 2
RETREG3-202ENST00000585726 GIGYF2Q6Y7W6 1299 aaKnown RBP27.54■■■□□ 2
RETREG3-202ENST00000585726 ANKRD13DQ6ZTN6 518 aa27.54■■■□□ 2
RETREG3-202ENST00000585726 NLGN2Q8NFZ4 835 aa27.54■■■□□ 2
RETREG3-202ENST00000585726 CARMIL3Q8ND23 1372 aa27.53■■■□□ 2
RETREG3-202ENST00000585726 RGL2O15211 777 aa27.53■■■□□ 2
RETREG3-202ENST00000585726 CD2APQ9Y5K6 639 aa27.53■■■□□ 2
RETREG3-202ENST00000585726 G2E3Q7L622 706 aa27.52■■■□□ 2
RETREG3-202ENST00000585726 CCDC24Q8N4L8 307 aa27.52■■■□□ 2
RETREG3-202ENST00000585726 PLBD2Q8NHP8 589 aa27.52■■■□□ 2
RETREG3-202ENST00000585726 ZBED9Q6R2W3 1325 aa27.51■■□□□ 1.99
RETREG3-202ENST00000585726 RIC3Q7Z5B4 369 aa27.51■■□□□ 1.99
RETREG3-202ENST00000585726 NBPF5PQ86XG9 351 aaPredicted RBP27.51■■□□□ 1.99
RETREG3-202ENST00000585726 NUP98P52948 1817 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 DDX58O95786 925 aaKnown RBP27.48■■□□□ 1.99
RETREG3-202ENST00000585726 HSP90AB3PQ58FF7 597 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 ZNF34Q8IZ26 560 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 CNBD1Q8NA66 436 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 ZNF428Q96B54 188 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 C10orf71Q711Q0 1435 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 ATP10DQ9P241 1426 aa27.48■■□□□ 1.99
RETREG3-202ENST00000585726 UBN2Q6ZU65 1347 aa27.47■■□□□ 1.99
RETREG3-202ENST00000585726 TCIRG1Q13488 830 aa27.47■■□□□ 1.99
RETREG3-202ENST00000585726 PRR5LQ6MZQ0 368 aa27.47■■□□□ 1.99
RETREG3-202ENST00000585726 GTF2E1P29083 439 aaPredicted RBP27.46■■□□□ 1.99
RETREG3-202ENST00000585726 AFDNP55196 1824 aaKnown RBP27.46■■□□□ 1.99
RETREG3-202ENST00000585726 ATP5J2-PTCD1G3V325 749 aa27.45■■□□□ 1.98
RETREG3-202ENST00000585726 FLIIQ13045 1269 aa27.45■■□□□ 1.98
RETREG3-202ENST00000585726 SUSD4Q5VX71 490 aa27.45■■□□□ 1.98
RETREG3-202ENST00000585726 TPTE2Q6XPS3 522 aa27.45■■□□□ 1.98
RETREG3-202ENST00000585726 WWC3Q9ULE0 1092 aa27.45■■□□□ 1.98
RETREG3-202ENST00000585726 A0A0G2JLW4 131 aa27.44■■□□□ 1.98
RETREG3-202ENST00000585726 ST5P78524 1137 aa27.44■■□□□ 1.98
RETREG3-202ENST00000585726 FKBP5Q13451 457 aaPredicted RBP27.44■■□□□ 1.98
RETREG3-202ENST00000585726 MAP3K2Q9Y2U5 619 aa27.44■■□□□ 1.98
RETREG3-202ENST00000585726 PI4KAP2A4QPH2 592 aa27.43■■□□□ 1.98
RETREG3-202ENST00000585726 KSR2Q6VAB6 950 aa27.43■■□□□ 1.98
RETREG3-202ENST00000585726 PELP1Q8IZL8 1130 aaKnown RBP27.43■■□□□ 1.98
RETREG3-202ENST00000585726 PI4KAP1Q8N8J0 262 aa27.43■■□□□ 1.98
RETREG3-202ENST00000585726 MYD88Q99836 296 aa27.43■■□□□ 1.98
RETREG3-202ENST00000585726 BCL2L13Q9BXK5 485 aa27.43■■□□□ 1.98
RETREG3-202ENST00000585726 NRXN2Q9P2S2 1712 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 DPEP1P16444 411 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 TGFB2P61812 414 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 PARP10Q53GL7 1025 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 NUTM1Q86Y26 1132 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 SSH1Q8WYL5 1049 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 YTHDC1Q96MU7 727 aaKnown RBP27.42■■□□□ 1.98
RETREG3-202ENST00000585726 NYXQ9GZU5 481 aa27.42■■□□□ 1.98
RETREG3-202ENST00000585726 PPP1R42Q7Z4L9 355 aa27.41■■□□□ 1.98
RETREG3-202ENST00000585726 NLRP10Q86W26 655 aa27.41■■□□□ 1.98
RETREG3-202ENST00000585726 ADCY9O60503 1353 aa27.4■■□□□ 1.98
RETREG3-202ENST00000585726 CHRNA5P30532 468 aa27.4■■□□□ 1.98
RETREG3-202ENST00000585726 MRPL50Q8N5N7 158 aaKnown RBP27.4■■□□□ 1.98
RETREG3-202ENST00000585726 UTP14AQ9BVJ6 771 aaKnown RBP27.4■■□□□ 1.98
RETREG3-202ENST00000585726 PXDNLA1KZ92 1463 aa27.39■■□□□ 1.98
RETREG3-202ENST00000585726 CT47B1P0C2W7 299 aaPredicted RBP27.39■■□□□ 1.98
RETREG3-202ENST00000585726 ERFEQ4G0M1 354 aa27.39■■□□□ 1.98
RETREG3-202ENST00000585726 ISCA1Q9BUE6 129 aa27.39■■□□□ 1.98
RETREG3-202ENST00000585726 METTL22Q9BUU2 404 aaPredicted RBP27.39■■□□□ 1.98
RETREG3-202ENST00000585726 BRIP1Q9BX63 1249 aa27.39■■□□□ 1.98
RETREG3-202ENST00000585726 ARFGEF2Q9Y6D5 1785 aa27.39■■□□□ 1.98
RETREG3-202ENST00000585726 NTSR2O95665 410 aa27.38■■□□□ 1.97
RETREG3-202ENST00000585726 SMC4Q9NTJ3 1288 aa27.38■■□□□ 1.97
RETREG3-202ENST00000585726 KIF13BQ9NQT8 1826 aa27.37■■□□□ 1.97
RETREG3-202ENST00000585726 PDE6BP35913 854 aa27.37■■□□□ 1.97
RETREG3-202ENST00000585726 C2CD5Q86YS7 1000 aa27.37■■□□□ 1.97
RETREG3-202ENST00000585726 TRMT112Q9UI30 125 aaKnown RBP27.37■■□□□ 1.97
RETREG3-202ENST00000585726 ANKRD36CQ5JPF3 1778 aa27.36■■□□□ 1.97
RETREG3-202ENST00000585726 DCAF8L1A6NGE4 600 aa27.36■■□□□ 1.97
RETREG3-202ENST00000585726 GPR162Q16538 588 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms