RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 SLX4Q8IY92 1834 aa30.52■■■□□ 2.48
LSM7-203ENST00000585409 FMNL2Q96PY5 1086 aa30.52■■■□□ 2.48
LSM7-203ENST00000585409 C21orf2O43822 256 aa30.51■■■□□ 2.47
LSM7-203ENST00000585409 CAMTA2O94983 1202 aa30.51■■■□□ 2.47
LSM7-203ENST00000585409 ZNF330Q9Y3S2 320 aaPredicted RBP30.51■■■□□ 2.47
LSM7-203ENST00000585409 LTBP3Q9NS15 1303 aa30.5■■■□□ 2.47
LSM7-203ENST00000585409 A1BGP04217 495 aa30.5■■■□□ 2.47
LSM7-203ENST00000585409 CCDC24Q8N4L8 307 aa30.5■■■□□ 2.47
LSM7-203ENST00000585409 DPY19L2Q6NUT2 758 aa30.49■■■□□ 2.47
LSM7-203ENST00000585409 ERFEQ4G0M1 354 aa30.47■■■□□ 2.47
LSM7-203ENST00000585409 CNBD1Q8NA66 436 aa30.47■■■□□ 2.47
LSM7-203ENST00000585409 SETDB2Q96T68 719 aa30.47■■■□□ 2.47
LSM7-203ENST00000585409 ZNF219Q9P2Y4 722 aaPredicted RBP30.47■■■□□ 2.47
LSM7-203ENST00000585409 KCNQ3O43525 872 aa30.46■■■□□ 2.47
LSM7-203ENST00000585409 PHACTR3Q96KR7 559 aa30.46■■■□□ 2.47
LSM7-203ENST00000585409 STYK1Q6J9G0 422 aa30.45■■■□□ 2.47
LSM7-203ENST00000585409 BTBD11A6QL63 1104 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 SRGNP10124 158 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 CNKSR1Q969H4 720 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 PLEKHF1Q96S99 279 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 TAOK3Q9H2K8 898 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 ADAMTS8Q9UP79 889 aa30.44■■■□□ 2.46
LSM7-203ENST00000585409 NPM2Q86SE8 214 aaKnown RBP30.43■■■□□ 2.46
LSM7-203ENST00000585409 DZIP3Q86Y13 1208 aaKnown RBP30.43■■■□□ 2.46
LSM7-203ENST00000585409 RTF1Q92541 710 aaKnown RBP30.43■■■□□ 2.46
LSM7-203ENST00000585409 ST5P78524 1137 aa30.42■■■□□ 2.46
LSM7-203ENST00000585409 PRPF40BQ6NWY9 871 aaKnown RBP30.42■■■□□ 2.46
LSM7-203ENST00000585409 RUNDC1Q96C34 613 aa30.42■■■□□ 2.46
LSM7-203ENST00000585409 USP16Q9Y5T5 823 aa30.42■■■□□ 2.46
LSM7-203ENST00000585409 HTATSF1O43719 755 aaKnown RBP30.41■■■□□ 2.46
LSM7-203ENST00000585409 MASTLQ96GX5 879 aa30.4■■■□□ 2.46
LSM7-203ENST00000585409 NPHP1O15259 732 aa30.39■■■□□ 2.46
LSM7-203ENST00000585409 NFE2L2Q16236 605 aa30.39■■■□□ 2.46
LSM7-203ENST00000585409 CCDC184Q52MB2 194 aa30.39■■■□□ 2.46
LSM7-203ENST00000585409 SOGA3Q5TF21 947 aa30.39■■■□□ 2.46
LSM7-203ENST00000585409 CLEC4GQ6UXB4 293 aa30.39■■■□□ 2.46
LSM7-203ENST00000585409 CCER2I3L3R5 266 aa30.38■■■□□ 2.45
LSM7-203ENST00000585409 HSPA1AP0DMV8 641 aaKnown RBP30.38■■■□□ 2.45
LSM7-203ENST00000585409 HSPA1BP0DMV9 641 aaKnown RBP30.38■■■□□ 2.45
LSM7-203ENST00000585409 PNISRQ8TF01 805 aaKnown RBP30.38■■■□□ 2.45
LSM7-203ENST00000585409 PRAMEF22A3QJZ6 481 aa30.37■■■□□ 2.45
LSM7-203ENST00000585409 CHADLQ6NUI6 762 aa30.37■■■□□ 2.45
LSM7-203ENST00000585409 TNS4Q8IZW8 715 aa30.37■■■□□ 2.45
LSM7-203ENST00000585409 C7orf43Q8WVR3 580 aa30.37■■■□□ 2.45
LSM7-203ENST00000585409 SCN4AP35499 1836 aa30.37■■■□□ 2.45
LSM7-203ENST00000585409 DDNO94850 711 aaPredicted RBP30.36■■■□□ 2.45
LSM7-203ENST00000585409 PIP4K2AP48426 406 aaPredicted RBP30.36■■■□□ 2.45
LSM7-203ENST00000585409 LMOD3Q0VAK6 560 aa30.36■■■□□ 2.45
LSM7-203ENST00000585409 SNRPA1P09661 255 aaKnown RBP30.35■■■□□ 2.45
LSM7-203ENST00000585409 NBPF5PQ86XG9 351 aaPredicted RBP30.34■■■□□ 2.45
LSM7-203ENST00000585409 CCDC146Q8IYE0 955 aa30.34■■■□□ 2.45
LSM7-203ENST00000585409 KLRG2A4D1S0 409 aaPredicted RBP30.33■■■□□ 2.45
LSM7-203ENST00000585409 RGL2O15211 777 aa30.33■■■□□ 2.45
LSM7-203ENST00000585409 POTEIP0CG38 1075 aa30.33■■■□□ 2.45
LSM7-203ENST00000585409 POTEJP0CG39 1038 aa30.33■■■□□ 2.45
LSM7-203ENST00000585409 CREBZFQ9NS37 354 aa30.33■■■□□ 2.45
LSM7-203ENST00000585409 ZNF652Q9Y2D9 606 aa30.33■■■□□ 2.45
LSM7-203ENST00000585409 NPR1P16066 1061 aa30.31■■■□□ 2.44
LSM7-203ENST00000585409 MCM10Q7L590 875 aa30.31■■■□□ 2.44
LSM7-203ENST00000585409 L3MBTL3Q96JM7 780 aaPredicted RBP30.31■■■□□ 2.44
LSM7-203ENST00000585409 TMPOP42166 694 aaKnown RBP30.3■■■□□ 2.44
LSM7-203ENST00000585409 RIPK4P57078 832 aa30.3■■■□□ 2.44
LSM7-203ENST00000585409 CCDC93Q567U6 631 aa30.3■■■□□ 2.44
LSM7-203ENST00000585409 LAMB4A4D0S4 1761 aa30.3■■■□□ 2.44
LSM7-203ENST00000585409 NBPF26B4DH59 902 aa30.29■■■□□ 2.44
LSM7-203ENST00000585409 NBPF10Q6P3W6 841 aaKnown RBP30.29■■■□□ 2.44
LSM7-203ENST00000585409 NBPF15Q8N660 670 aa30.29■■■□□ 2.44
LSM7-203ENST00000585409 IQCA1LA6NCM1 817 aa30.28■■■□□ 2.44
LSM7-203ENST00000585409 CAPN15O75808 1086 aa30.27■■■□□ 2.44
LSM7-203ENST00000585409 TPTE2Q6XPS3 522 aa30.27■■■□□ 2.44
LSM7-203ENST00000585409 NIP7Q9Y221 180 aaKnown RBP eCLIP30.27■■■□□ 2.44
LSM7-203ENST00000585409 PASKQ96RG2 1323 aa30.26■■■□□ 2.44
LSM7-203ENST00000585409 FKBP4Q02790 459 aaKnown RBP eCLIP30.26■■■□□ 2.43
LSM7-203ENST00000585409 FAM9BQ8IZU0 186 aa30.26■■■□□ 2.43
LSM7-203ENST00000585409 DCTN1Q14203 1278 aa30.25■■■□□ 2.43
LSM7-203ENST00000585409 LDHDQ86WU2 507 aa30.25■■■□□ 2.43
LSM7-203ENST00000585409 TAF1DQ9H5J8 278 aaPredicted RBP30.25■■■□□ 2.43
LSM7-203ENST00000585409 ADAMTSL1Q8N6G6 1762 aa30.25■■■□□ 2.43
LSM7-203ENST00000585409 DLG5Q8TDM6 1919 aa30.24■■■□□ 2.43
LSM7-203ENST00000585409 MKRN1Q9UHC7 482 aaKnown RBP30.24■■■□□ 2.43
LSM7-203ENST00000585409 NEUROD2Q15784 382 aa30.23■■■□□ 2.43
LSM7-203ENST00000585409 ZNF541Q9H0D2 1346 aa30.22■■■□□ 2.43
LSM7-203ENST00000585409 APAF1O14727 1248 aa30.22■■■□□ 2.43
LSM7-203ENST00000585409 OLFM4Q6UX06 510 aa30.22■■■□□ 2.43
LSM7-203ENST00000585409 ZNF277Q9NRM2 450 aaPredicted RBP30.22■■■□□ 2.43
LSM7-203ENST00000585409 CNTNAP1P78357 1384 aa30.22■■■□□ 2.43
LSM7-203ENST00000585409 NUP98P52948 1817 aa30.22■■■□□ 2.43
LSM7-203ENST00000585409 KDM3BQ7LBC6 1761 aa30.21■■■□□ 2.43
LSM7-203ENST00000585409 HLFQ16534 295 aa30.21■■■□□ 2.43
LSM7-203ENST00000585409 RTKN2Q8IZC4 609 aa30.21■■■□□ 2.43
LSM7-203ENST00000585409 MIER1Q8N108 512 aa30.21■■■□□ 2.43
LSM7-203ENST00000585409 RRP7AQ9Y3A4 280 aaKnown RBP30.21■■■□□ 2.43
LSM7-203ENST00000585409 SNED1Q8TER0 1413 aa30.21■■■□□ 2.43
LSM7-203ENST00000585409 TAF7Q15545 349 aaPredicted RBP30.2■■■□□ 2.43
LSM7-203ENST00000585409 ITGBL1O95965 494 aaPredicted RBP30.18■■■□□ 2.42
LSM7-203ENST00000585409 CALD1Q05682 793 aaKnown RBP30.18■■■□□ 2.42
LSM7-203ENST00000585409 FAM177BA6PVY3 158 aa30.17■■■□□ 2.42
LSM7-203ENST00000585409 ALDH1B1P30837 517 aa30.17■■■□□ 2.42
LSM7-203ENST00000585409 NCBP3Q53F19 620 aaKnown RBP30.17■■■□□ 2.42
LSM7-203ENST00000585409 FZD9O00144 591 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms