RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
CHAF1A-202ENST00000585371 GYS1P13807 737 aa17.18■□□□□ 0.34
CHAF1A-202ENST00000585371 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
CHAF1A-202ENST00000585371 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
CHAF1A-202ENST00000585371 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
CHAF1A-202ENST00000585371 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 A0A087WZG4 1122 aa17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 RFC4P35249 363 aa17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
CHAF1A-202ENST00000585371 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
CHAF1A-202ENST00000585371 PHAXQ9H814 394 aaKnown RBP17.16■□□□□ 0.34
CHAF1A-202ENST00000585371 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
CHAF1A-202ENST00000585371 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
CHAF1A-202ENST00000585371 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 G2E3Q7L622 706 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
CHAF1A-202ENST00000585371 FKBP8Q14318 412 aa17.14■□□□□ 0.33
CHAF1A-202ENST00000585371 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
CHAF1A-202ENST00000585371 MAP3K15Q6ZN16 1313 aa17.14■□□□□ 0.33
CHAF1A-202ENST00000585371 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
CHAF1A-202ENST00000585371 RGL2O15211 777 aa17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 HLFQ16534 295 aa17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 GOLGB1Q14789 3259 aaKnown RBP17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 ADCY9O60503 1353 aa17.13■□□□□ 0.33
CHAF1A-202ENST00000585371 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 ZPR1O75312 459 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 TM4SF1P30408 202 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
CHAF1A-202ENST00000585371 MMP10P09238 476 aa17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
CHAF1A-202ENST00000585371 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
CHAF1A-202ENST00000585371 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
CHAF1A-202ENST00000585371 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
CHAF1A-202ENST00000585371 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
CHAF1A-202ENST00000585371 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 TGFB2P61812 414 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 DDR1Q08345 913 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 NFIXQ14938 502 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 ALDH1L2Q3SY69 923 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
CHAF1A-202ENST00000585371 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
CHAF1A-202ENST00000585371 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
CHAF1A-202ENST00000585371 FLIIQ13045 1269 aa17.08■□□□□ 0.32
CHAF1A-202ENST00000585371 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
CHAF1A-202ENST00000585371 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
CHAF1A-202ENST00000585371 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
CHAF1A-202ENST00000585371 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
CHAF1A-202ENST00000585371 UBN2Q6ZU65 1347 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 PI4KAP2A4QPH2 592 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 PI4KAP1Q8N8J0 262 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
CHAF1A-202ENST00000585371 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
CHAF1A-202ENST00000585371 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
CHAF1A-202ENST00000585371 ISCA1Q9BUE6 129 aa17.04■□□□□ 0.32
CHAF1A-202ENST00000585371 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
CHAF1A-202ENST00000585371 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 BCAR3O75815 825 aa17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CHAF1A-202ENST00000585371 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 SERPINB2P05120 415 aa17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 GPTP24298 496 aa17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 SETDB2Q96T68 719 aa17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
CHAF1A-202ENST00000585371 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 F6X3S4 739 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 TRIM28Q13263 835 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms