RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 BTBD11A6QL63 1104 aa13.95□□□□□ -0.18
CASC3-210ENST00000584997 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
CASC3-210ENST00000584997 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
CASC3-210ENST00000584997 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
CASC3-210ENST00000584997 CEMIPQ8WUJ3 1361 aa13.95□□□□□ -0.18
CASC3-210ENST00000584997 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
CASC3-210ENST00000584997 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
CASC3-210ENST00000584997 MASTLQ96GX5 879 aa13.94□□□□□ -0.18
CASC3-210ENST00000584997 SRGNP10124 158 aa13.93□□□□□ -0.18
CASC3-210ENST00000584997 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
CASC3-210ENST00000584997 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
CASC3-210ENST00000584997 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
CASC3-210ENST00000584997 CFAP53Q96M91 514 aa13.93□□□□□ -0.18
CASC3-210ENST00000584997 KCNQ3O43525 872 aa13.92□□□□□ -0.18
CASC3-210ENST00000584997 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
CASC3-210ENST00000584997 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
CASC3-210ENST00000584997 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
CASC3-210ENST00000584997 ZNF652Q9Y2D9 606 aa13.92□□□□□ -0.18
CASC3-210ENST00000584997 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 RTF1Q92541 710 aaKnown RBP13.91□□□□□ -0.18
CASC3-210ENST00000584997 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 SCN4AP35499 1836 aa13.91□□□□□ -0.18
CASC3-210ENST00000584997 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
CASC3-210ENST00000584997 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
CASC3-210ENST00000584997 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
CASC3-210ENST00000584997 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
CASC3-210ENST00000584997 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
CASC3-210ENST00000584997 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
CASC3-210ENST00000584997 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
CASC3-210ENST00000584997 NPR1P16066 1061 aa13.89□□□□□ -0.19
CASC3-210ENST00000584997 MCM10Q7L590 875 aa13.89□□□□□ -0.19
CASC3-210ENST00000584997 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
CASC3-210ENST00000584997 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.193e-7■■■■■ 27
CASC3-210ENST00000584997 TPTE2Q6XPS3 522 aa13.88□□□□□ -0.19
CASC3-210ENST00000584997 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
CASC3-210ENST00000584997 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
CASC3-210ENST00000584997 FKBP4Q02790 459 aaKnown RBP eCLIP13.87□□□□□ -0.19
CASC3-210ENST00000584997 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
CASC3-210ENST00000584997 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
CASC3-210ENST00000584997 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
CASC3-210ENST00000584997 GTF2E1P29083 439 aaPredicted RBP13.86□□□□□ -0.19
CASC3-210ENST00000584997 EAPPQ56P03 285 aaPredicted RBP13.86□□□□□ -0.19
CASC3-210ENST00000584997 TAF1DQ9H5J8 278 aaPredicted RBP13.86□□□□□ -0.19
CASC3-210ENST00000584997 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
CASC3-210ENST00000584997 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
CASC3-210ENST00000584997 CNTNAP1P78357 1384 aa13.85□□□□□ -0.19
CASC3-210ENST00000584997 KLRG2A4D1S0 409 aaPredicted RBP13.85□□□□□ -0.19
CASC3-210ENST00000584997 RGL2O15211 777 aa13.85□□□□□ -0.19
CASC3-210ENST00000584997 DCTN1Q14203 1278 aa13.85□□□□□ -0.19
CASC3-210ENST00000584997 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
CASC3-210ENST00000584997 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
CASC3-210ENST00000584997 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
CASC3-210ENST00000584997 OLFM4Q6UX06 510 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 HACL1Q9UJ83 578 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 PASKQ96RG2 1323 aa13.84□□□□□ -0.19
CASC3-210ENST00000584997 TMEM88BA6NKF7 163 aa13.83□□□□□ -0.2
CASC3-210ENST00000584997 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.2
CASC3-210ENST00000584997 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
CASC3-210ENST00000584997 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
CASC3-210ENST00000584997 NUP98P52948 1817 aa13.83□□□□□ -0.2
CASC3-210ENST00000584997 FOXN1O15353 648 aa13.82□□□□□ -0.2
CASC3-210ENST00000584997 NEFMP07197 916 aa13.82□□□□□ -0.2
CASC3-210ENST00000584997 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
CASC3-210ENST00000584997 EPHX2P34913 555 aa13.82□□□□□ -0.2
CASC3-210ENST00000584997 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
CASC3-210ENST00000584997 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
CASC3-210ENST00000584997 HLFQ16534 295 aa13.82□□□□□ -0.2
CASC3-210ENST00000584997 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
CASC3-210ENST00000584997 SYNE4Q8N205 404 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 JDP2Q8WYK2 163 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 NYXQ9GZU5 481 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
CASC3-210ENST00000584997 FZD9O00144 591 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 ITGBL1O95965 494 aaPredicted RBP13.8□□□□□ -0.2
CASC3-210ENST00000584997 VEGFBP49765 207 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 GPC2Q8N158 579 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 RPGRQ92834 1020 aaKnown RBP13.8□□□□□ -0.2
CASC3-210ENST00000584997 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 ABCC12Q96J65 1359 aa13.8□□□□□ -0.2
CASC3-210ENST00000584997 CTCFP49711 727 aaPredicted RBP13.79□□□□□ -0.2
CASC3-210ENST00000584997 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
CASC3-210ENST00000584997 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
CASC3-210ENST00000584997 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
CASC3-210ENST00000584997 PNISRQ8TF01 805 aaKnown RBP13.79□□□□□ -0.2
CASC3-210ENST00000584997 PSMD1Q99460 953 aa13.79□□□□□ -0.2
CASC3-210ENST00000584997 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
CASC3-210ENST00000584997 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
CASC3-210ENST00000584997 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
CASC3-210ENST00000584997 CRY2Q49AN0 593 aa13.78□□□□□ -0.2
CASC3-210ENST00000584997 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms