RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 GRIN2CQ14957 1233 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 HDGFL1Q5TGJ6 251 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 CCDC102BQ68D86 513 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 MDFIQ99750 246 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 SERTM1A2A2V5 107 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 M0R2N6 131 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 PCBP4P57723 403 aaKnown RBP6.66□□□□□ -1.34
VAPA-208ENST00000584796 SH3PXD2AQ5TCZ1 1133 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 LRRC69Q6ZNQ3 347 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 LARGE2Q8N3Y3 721 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 ZNF232Q9UNY5 417 aa6.66□□□□□ -1.34
VAPA-208ENST00000584796 DKK1O94907 266 aa6.65□□□□□ -1.34
VAPA-208ENST00000584796 PSMA6P60900 246 aaKnown RBP6.65□□□□□ -1.34
VAPA-208ENST00000584796 SIX5Q8N196 739 aa6.65□□□□□ -1.34
VAPA-208ENST00000584796 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
VAPA-208ENST00000584796 NOP53Q9NZM5 478 aaKnown RBP6.65□□□□□ -1.34
VAPA-208ENST00000584796 PRR12Q9ULL5 1215 aa6.65□□□□□ -1.34
VAPA-208ENST00000584796 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
VAPA-208ENST00000584796 BAG6P46379 1132 aa6.64□□□□□ -1.35
VAPA-208ENST00000584796 C1orf53Q5VUE5 145 aa6.64□□□□□ -1.35
VAPA-208ENST00000584796 OGFOD1Q8N543 542 aa6.64□□□□□ -1.35
VAPA-208ENST00000584796 MKRN1Q9UHC7 482 aaKnown RBP6.64□□□□□ -1.35
VAPA-208ENST00000584796 ELOA3CA0A087WX78 387 aaPredicted RBP6.63□□□□□ -1.35
VAPA-208ENST00000584796 ELOA3DA6NLF2 546 aaPredicted RBP6.63□□□□□ -1.35
VAPA-208ENST00000584796 ELOA3BQ3SY89 546 aa6.63□□□□□ -1.35
VAPA-208ENST00000584796 SYT9Q86SS6 491 aa6.63□□□□□ -1.35
VAPA-208ENST00000584796 FNBP4Q8N3X1 1017 aaPredicted RBP6.63□□□□□ -1.35
VAPA-208ENST00000584796 ELOA3Q8NG57 546 aa6.63□□□□□ -1.35
VAPA-208ENST00000584796 RHPN1Q8TCX5 695 aa6.63□□□□□ -1.35
VAPA-208ENST00000584796 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
VAPA-208ENST00000584796 SIN3BO75182 1162 aa6.62□□□□□ -1.35
VAPA-208ENST00000584796 SFSWAPQ12872 951 aaKnown RBP6.62□□□□□ -1.35
VAPA-208ENST00000584796 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
VAPA-208ENST00000584796 TRIM11Q96F44 468 aa6.62□□□□□ -1.35
VAPA-208ENST00000584796 C1QTNF9BB2RNN3 333 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 K7ELQ4 463 aaPredicted RBP6.61□□□□□ -1.35
VAPA-208ENST00000584796 C21orf2O43822 256 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 KCNQ4P56696 695 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
VAPA-208ENST00000584796 TNFRSF25Q93038 417 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 SLC30A3Q99726 388 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 PHACTR1Q9C0D0 580 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 NEUROD4Q9HD90 331 aa6.61□□□□□ -1.35
VAPA-208ENST00000584796 CHRNA4P43681 627 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 PROSER2Q86WR7 435 aaPredicted RBP6.6□□□□□ -1.35
VAPA-208ENST00000584796 STAG2Q8N3U4 1231 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 GLMNQ92990 594 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
VAPA-208ENST00000584796 ANKIB1Q9P2G1 1089 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 CHMP3Q9Y3E7 222 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 HCN4Q9Y3Q4 1203 aa6.6□□□□□ -1.35
VAPA-208ENST00000584796 SFI1A8K8P3 1242 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 PPP1R12BO60237 982 aaPredicted RBP6.59□□□□□ -1.35
VAPA-208ENST00000584796 ALAS2P22557 587 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 TYRO3Q06418 890 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 HSH2DQ96JZ2 352 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 PLVAPQ9BX97 442 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
VAPA-208ENST00000584796 MAFBQ9Y5Q3 323 aaPredicted RBP6.59□□□□□ -1.35
VAPA-208ENST00000584796 SPATA31C1P0DKV0 1188 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 COL9A3Q14050 684 aaPredicted RBP6.58□□□□□ -1.36
VAPA-208ENST00000584796 ZNF280CQ8ND82 737 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 SUSD3Q96L08 255 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 CEP63Q96MT8 703 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 C2orf49Q9BVC5 232 aaPredicted RBP6.58□□□□□ -1.36
VAPA-208ENST00000584796 PRDM6Q9NQX0 595 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 TFIP11Q9UBB9 837 aaKnown RBP6.58□□□□□ -1.36
VAPA-208ENST00000584796 STARD13Q9Y3M8 1113 aa6.58□□□□□ -1.36
VAPA-208ENST00000584796 FURINP09958 794 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 RASA1P20936 1047 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 SEC13P55735 322 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 TMEM132AQ24JP5 1023 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 ALDH16A1Q8IZ83 802 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 RBM19Q9Y4C8 960 aaKnown RBP6.57□□□□□ -1.36
VAPA-208ENST00000584796 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
VAPA-208ENST00000584796 ADH7P40394 386 aa6.56□□□□□ -1.36
VAPA-208ENST00000584796 NEUROD1Q13562 356 aa6.56□□□□□ -1.36
VAPA-208ENST00000584796 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
VAPA-208ENST00000584796 SPDYE3A6NKU9 549 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 M0R082 166 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 ALBP02768 609 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
VAPA-208ENST00000584796 RAB44Q7Z6P3 723 aaPredicted RBP6.55□□□□□ -1.36
VAPA-208ENST00000584796 MICALL1Q8N3F8 863 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 ZNF417Q8TAU3 575 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 SCG3Q8WXD2 468 aaKnown RBP6.55□□□□□ -1.36
VAPA-208ENST00000584796 ZNF587Q96SQ5 575 aaPredicted RBP6.55□□□□□ -1.36
VAPA-208ENST00000584796 PPP1R12CQ9BZL4 782 aa6.55□□□□□ -1.36
VAPA-208ENST00000584796 A6NJR5 290 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 PTK7Q13308 1070 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 HIF1AQ16665 826 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 KANK4Q5T7N3 995 aaPredicted RBP6.54□□□□□ -1.36
VAPA-208ENST00000584796 IER5Q5VY09 327 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 C20orf204Q6ZNR8 217 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
VAPA-208ENST00000584796 NID1P14543 1247 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms