RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PKP1Q13835 747 aa12.55□□□□□ -0.4
RFFL-212ENST00000584655 PUS3Q9BZE2 481 aaKnown RBP12.55□□□□□ -0.4
RFFL-212ENST00000584655 PIGBQ92521 554 aa12.54□□□□□ -0.4
RFFL-212ENST00000584655 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
RFFL-212ENST00000584655 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
RFFL-212ENST00000584655 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
RFFL-212ENST00000584655 TFCP2Q12800 502 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 PI16Q6UXB8 463 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 CHST3Q7LGC8 479 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
RFFL-212ENST00000584655 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
RFFL-212ENST00000584655 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
RFFL-212ENST00000584655 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
RFFL-212ENST00000584655 ATP6V1AP38606 617 aa12.52□□□□□ -0.4
RFFL-212ENST00000584655 DDB1Q16531 1140 aa12.52□□□□□ -0.4
RFFL-212ENST00000584655 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.4
RFFL-212ENST00000584655 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.4
RFFL-212ENST00000584655 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.4
RFFL-212ENST00000584655 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 SSFA2P28290 1259 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 HLFQ16534 295 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 LRRC24Q50LG9 513 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
RFFL-212ENST00000584655 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
RFFL-212ENST00000584655 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
RFFL-212ENST00000584655 HAND2P61296 217 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 GOLIM4O00461 696 aa12.51□□□□□ -0.41
RFFL-212ENST00000584655 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
RFFL-212ENST00000584655 TAF5LO75529 589 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 APPP05067 770 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 CNNM1Q9NRU3 951 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 NECAB1Q8N987 351 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 PEAK1Q9H792 1746 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 MEGF6O75095 1541 aa12.5□□□□□ -0.41
RFFL-212ENST00000584655 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 ERC2O15083 957 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 GCKRQ14397 625 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 FERMT3Q86UX7 667 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 KDRP35968 1356 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 NEURL4Q96JN8 1562 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 SLIT1O75093 1534 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
RFFL-212ENST00000584655 ADCY9O60503 1353 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
RFFL-212ENST00000584655 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
RFFL-212ENST00000584655 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
RFFL-212ENST00000584655 PDIA6Q15084 440 aa12.48□□□□□ -0.41
RFFL-212ENST00000584655 CCDC57Q2TAC2 916 aa12.48□□□□□ -0.41
RFFL-212ENST00000584655 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
RFFL-212ENST00000584655 HSP90B1P14625 803 aaKnown RBP12.47□□□□□ -0.41
RFFL-212ENST00000584655 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
RFFL-212ENST00000584655 CEBPZQ03701 1054 aaKnown RBP12.47□□□□□ -0.41
RFFL-212ENST00000584655 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
RFFL-212ENST00000584655 MST1RQ04912 1400 aa12.47□□□□□ -0.41
RFFL-212ENST00000584655 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
RFFL-212ENST00000584655 ANKARQ7Z5J8 1434 aa12.47□□□□□ -0.41
RFFL-212ENST00000584655 REC8O95072 547 aa12.46□□□□□ -0.41
RFFL-212ENST00000584655 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.41
RFFL-212ENST00000584655 IDH1O75874 414 aaKnown RBP12.46□□□□□ -0.41
RFFL-212ENST00000584655 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.42
RFFL-212ENST00000584655 SASH1O94885 1247 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 SLC51AQ86UW1 340 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 FBXW7Q969H0 707 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 DDX11Q96FC9 970 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 KAZALD1Q96I82 304 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 ITSN1Q15811 1721 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 PTH1RQ03431 593 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.42
RFFL-212ENST00000584655 STARD3NLO95772 234 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 CHMLP26374 656 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
RFFL-212ENST00000584655 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
RFFL-212ENST00000584655 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 ADORA1P30542 326 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
RFFL-212ENST00000584655 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
RFFL-212ENST00000584655 FAM173BQ6P4H8 233 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
RFFL-212ENST00000584655 USP26Q9BXU7 913 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms