RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 BRIP1Q9BX63 1249 aa20.87■□□□□ 0.93
SKA2-209ENST00000583976 GLTPD2A6NH11 291 aa20.85■□□□□ 0.93
SKA2-209ENST00000583976 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
SKA2-209ENST00000583976 NPHP1O15259 732 aa20.84■□□□□ 0.93
SKA2-209ENST00000583976 PDE6BP35913 854 aa20.84■□□□□ 0.93
SKA2-209ENST00000583976 SETDB2Q96T68 719 aa20.84■□□□□ 0.93
SKA2-209ENST00000583976 NBPF26B4DH59 902 aa20.83■□□□□ 0.93
SKA2-209ENST00000583976 PRPF40BQ6NWY9 871 aaKnown RBP20.83■□□□□ 0.93
SKA2-209ENST00000583976 NBPF10Q6P3W6 841 aaKnown RBP20.83■□□□□ 0.93
SKA2-209ENST00000583976 NBPF15Q8N660 670 aa20.83■□□□□ 0.93
SKA2-209ENST00000583976 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.93
SKA2-209ENST00000583976 RTF1Q92541 710 aaKnown RBP20.83■□□□□ 0.93
SKA2-209ENST00000583976 ST5P78524 1137 aa20.82■□□□□ 0.92
SKA2-209ENST00000583976 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
SKA2-209ENST00000583976 KLRG1Q96E93 195 aa20.82■□□□□ 0.92
SKA2-209ENST00000583976 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
SKA2-209ENST00000583976 POTECB2RU33 542 aa20.8■□□□□ 0.92
SKA2-209ENST00000583976 SRGNP10124 158 aa20.8■□□□□ 0.92
SKA2-209ENST00000583976 TAOK3Q9H2K8 898 aa20.8■□□□□ 0.92
SKA2-209ENST00000583976 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
SKA2-209ENST00000583976 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
SKA2-209ENST00000583976 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
SKA2-209ENST00000583976 STYK1Q6J9G0 422 aa20.79■□□□□ 0.92
SKA2-209ENST00000583976 NBPF5PQ86XG9 351 aaPredicted RBP20.79■□□□□ 0.92
SKA2-209ENST00000583976 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
SKA2-209ENST00000583976 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
SKA2-209ENST00000583976 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
SKA2-209ENST00000583976 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
SKA2-209ENST00000583976 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
SKA2-209ENST00000583976 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
SKA2-209ENST00000583976 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
SKA2-209ENST00000583976 HLFQ16534 295 aa20.76■□□□□ 0.91
SKA2-209ENST00000583976 JMYQ8N9B5 988 aa20.76■□□□□ 0.91
SKA2-209ENST00000583976 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
SKA2-209ENST00000583976 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
SKA2-209ENST00000583976 ZNF652Q9Y2D9 606 aa20.76■□□□□ 0.91
SKA2-209ENST00000583976 NUP98P52948 1817 aa20.75■□□□□ 0.91
SKA2-209ENST00000583976 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
SKA2-209ENST00000583976 POTEIP0CG38 1075 aa20.74■□□□□ 0.91
SKA2-209ENST00000583976 POTEJP0CG39 1038 aa20.74■□□□□ 0.91
SKA2-209ENST00000583976 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
SKA2-209ENST00000583976 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
SKA2-209ENST00000583976 C7orf43Q8WVR3 580 aa20.73■□□□□ 0.91
SKA2-209ENST00000583976 TAF7Q15545 349 aaPredicted RBP20.72■□□□□ 0.91
SKA2-209ENST00000583976 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
SKA2-209ENST00000583976 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
SKA2-209ENST00000583976 NGEFQ8N5V2 710 aa20.72■□□□□ 0.91
SKA2-209ENST00000583976 PLEKHF1Q96S99 279 aa20.72■□□□□ 0.91
SKA2-209ENST00000583976 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
SKA2-209ENST00000583976 SNED1Q8TER0 1413 aa20.71■□□□□ 0.91
SKA2-209ENST00000583976 NPR1P16066 1061 aa20.71■□□□□ 0.91
SKA2-209ENST00000583976 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
SKA2-209ENST00000583976 COL4A5P29400 1685 aa20.7■□□□□ 0.91
SKA2-209ENST00000583976 TTLL7Q6ZT98 887 aa20.7■□□□□ 0.9
SKA2-209ENST00000583976 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
SKA2-209ENST00000583976 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
SKA2-209ENST00000583976 RALBP1Q15311 655 aa20.69■□□□□ 0.9
SKA2-209ENST00000583976 NFE2L2Q16236 605 aa20.69■□□□□ 0.9
SKA2-209ENST00000583976 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SKA2-209ENST00000583976 NUTM1Q86Y26 1132 aa20.69■□□□□ 0.9
SKA2-209ENST00000583976 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
SKA2-209ENST00000583976 ADAMTSL1Q8N6G6 1762 aa20.68■□□□□ 0.9
SKA2-209ENST00000583976 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
SKA2-209ENST00000583976 COL13A1Q5TAT6 717 aaPredicted RBP20.68■□□□□ 0.9
SKA2-209ENST00000583976 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
SKA2-209ENST00000583976 SCN4AP35499 1836 aa20.68■□□□□ 0.9
SKA2-209ENST00000583976 RGL2O15211 777 aa20.67■□□□□ 0.9
SKA2-209ENST00000583976 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
SKA2-209ENST00000583976 MAP3K15Q6ZN16 1313 aa20.67■□□□□ 0.9
SKA2-209ENST00000583976 MYL6BP14649 208 aa20.66■□□□□ 0.9
SKA2-209ENST00000583976 GPTP24298 496 aa20.66■□□□□ 0.9
SKA2-209ENST00000583976 ZBTB3Q9H5J0 574 aa20.66■□□□□ 0.9
SKA2-209ENST00000583976 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
SKA2-209ENST00000583976 RIC1Q4ADV7 1423 aa20.65■□□□□ 0.9
SKA2-209ENST00000583976 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
SKA2-209ENST00000583976 NEFMP07197 916 aa20.65■□□□□ 0.9
SKA2-209ENST00000583976 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
SKA2-209ENST00000583976 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
SKA2-209ENST00000583976 HSPA1AP0DMV8 641 aaKnown RBP20.64■□□□□ 0.89
SKA2-209ENST00000583976 HSPA1BP0DMV9 641 aaKnown RBP20.64■□□□□ 0.89
SKA2-209ENST00000583976 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.89
SKA2-209ENST00000583976 LTBP1Q14766 1721 aa20.64■□□□□ 0.89
SKA2-209ENST00000583976 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
SKA2-209ENST00000583976 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
SKA2-209ENST00000583976 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
SKA2-209ENST00000583976 KIF6Q6ZMV9 814 aa20.63■□□□□ 0.89
SKA2-209ENST00000583976 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
SKA2-209ENST00000583976 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
SKA2-209ENST00000583976 ANKRD36CQ5JPF3 1778 aa20.63■□□□□ 0.89
SKA2-209ENST00000583976 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
SKA2-209ENST00000583976 MKRN1Q9UHC7 482 aaKnown RBP20.62■□□□□ 0.89
SKA2-209ENST00000583976 RNF123Q5XPI4 1314 aa20.61■□□□□ 0.89
SKA2-209ENST00000583976 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
SKA2-209ENST00000583976 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
SKA2-209ENST00000583976 LAMB2P55268 1798 aa20.61■□□□□ 0.89
SKA2-209ENST00000583976 IQCA1LA6NCM1 817 aa20.6■□□□□ 0.89
SKA2-209ENST00000583976 ANP32CO43423 234 aa20.6■□□□□ 0.89
SKA2-209ENST00000583976 NTSR2O95665 410 aa20.6■□□□□ 0.89
SKA2-209ENST00000583976 ANXA1P04083 346 aa20.6■□□□□ 0.89
SKA2-209ENST00000583976 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms