RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 NFKBIEO00221 500 aa11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 FSTL1Q12841 308 aa11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 NBPF5PQ86XG9 351 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 PNISRQ8TF01 805 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 SLX4Q8IY92 1834 aa11.53□□□□□ -0.56
CDK5RAP3-229ENST00000583697 C21orf2O43822 256 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
CDK5RAP3-229ENST00000583697 GLTPD2A6NH11 291 aa11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 STYK1Q6J9G0 422 aa11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 MASTLQ96GX5 879 aa11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 LTBP3Q9NS15 1303 aa11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NUP98P52948 1817 aa11.51□□□□□ -0.57
CDK5RAP3-229ENST00000583697 RGL2O15211 777 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 SRGNP10124 158 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 KIF6Q6ZMV9 814 aa11.5□□□□□ -0.57
CDK5RAP3-229ENST00000583697 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 FAM177BA6PVY3 158 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 GTF2E1P29083 439 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 PRELPP51888 382 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NPR1P16066 1061 aa11.48□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
CDK5RAP3-229ENST00000583697 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
CDK5RAP3-229ENST00000583697 ABCC12Q96J65 1359 aa11.47□□□□□ -0.57
CDK5RAP3-229ENST00000583697 IBTKQ9P2D0 1353 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-229ENST00000583697 MYL6BP14649 208 aa11.47□□□□□ -0.57
CDK5RAP3-229ENST00000583697 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-229ENST00000583697 NYXQ9GZU5 481 aa11.47□□□□□ -0.57
CDK5RAP3-229ENST00000583697 SCN4AP35499 1836 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 RIC1Q4ADV7 1423 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 ERBB4Q15303 1308 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 MAP3K15Q6ZN16 1313 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 HTRA3P83110 453 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 LMOD3Q0VAK6 560 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 RALBP1Q15311 655 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 HLFQ16534 295 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 TSPYL4Q9UJ04 414 aa11.46□□□□□ -0.57
CDK5RAP3-229ENST00000583697 ERVV-1B6SEH8 477 aa11.45□□□□□ -0.58
CDK5RAP3-229ENST00000583697 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
CDK5RAP3-229ENST00000583697 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-229ENST00000583697 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-229ENST00000583697 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
CDK5RAP3-229ENST00000583697 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDK5RAP3-229ENST00000583697 DNAJC5GQ8N7S2 189 aa11.44□□□□□ -0.58
CDK5RAP3-229ENST00000583697 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-229ENST00000583697 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 IQCA1LA6NCM1 817 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 GPTP24298 496 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 RIPK4P57078 832 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 TTLL7Q6ZT98 887 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 LAMB2P55268 1798 aa11.43□□□□□ -0.58
CDK5RAP3-229ENST00000583697 KLRG2A4D1S0 409 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-229ENST00000583697 DDNO94850 711 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-229ENST00000583697 WDR43Q15061 677 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDK5RAP3-229ENST00000583697 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 TMPOP42166 694 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 CRY2Q49AN0 593 aa11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 PPP1R42Q7Z4L9 355 aa11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 BABAM1Q9NWV8 329 aa11.41□□□□□ -0.58
CDK5RAP3-229ENST00000583697 ZNF541Q9H0D2 1346 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 POTECB2RU33 542 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 PARP10Q53GL7 1025 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 CC2D2BQ6DHV5 1058 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 TMX4Q9H1E5 349 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 ADAMTSL1Q8N6G6 1762 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
CDK5RAP3-229ENST00000583697 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms