RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 NRXN2Q9P2S2 1712 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 MYH14Q7Z406 1995 aaKnown RBP8.66□□□□□ -1.02
TVP23B-210ENST00000582288 ADAMTS7Q9UKP4 1686 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 FOXN1O15353 648 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 ZPR1O75312 459 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 CABP4P57796 275 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 RASSF7Q02833 373 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
TVP23B-210ENST00000582288 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
TVP23B-210ENST00000582288 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
TVP23B-210ENST00000582288 LTBP3Q9NS15 1303 aa8.65□□□□□ -1.02
TVP23B-210ENST00000582288 NFKBIEO00221 500 aa8.65□□□□□ -1.02
TVP23B-210ENST00000582288 PLEKHO1Q53GL0 409 aaPredicted RBP8.65□□□□□ -1.02
TVP23B-210ENST00000582288 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.02
TVP23B-210ENST00000582288 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
TVP23B-210ENST00000582288 NARFQ9UHQ1 456 aa8.65□□□□□ -1.02
TVP23B-210ENST00000582288 TJP1Q07157 1748 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 IQCA1LA6NCM1 817 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 H0YIN7 160 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 PPM1GO15355 546 aaPredicted RBP8.64□□□□□ -1.03
TVP23B-210ENST00000582288 RGS19P49795 217 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 MIER1Q8N108 512 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 POLKQ9UBT6 870 aa8.64□□□□□ -1.03
TVP23B-210ENST00000582288 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
TVP23B-210ENST00000582288 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
TVP23B-210ENST00000582288 PTCD1O75127 700 aaKnown RBP8.63□□□□□ -1.03
TVP23B-210ENST00000582288 MTHFSP49914 203 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
TVP23B-210ENST00000582288 NFIXQ14938 502 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 USPL1Q5W0Q7 1092 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 LDHDQ86WU2 507 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 C2CD5Q86YS7 1000 aa8.63□□□□□ -1.03
TVP23B-210ENST00000582288 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
TVP23B-210ENST00000582288 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
TVP23B-210ENST00000582288 SERPINB2P05120 415 aa8.62□□□□□ -1.03
TVP23B-210ENST00000582288 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
TVP23B-210ENST00000582288 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
TVP23B-210ENST00000582288 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
TVP23B-210ENST00000582288 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
TVP23B-210ENST00000582288 AFDNP55196 1824 aaKnown RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 RASSF10A6NK89 507 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 PDE6BP35913 854 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 VEGFBP49765 207 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 LBX1P52954 281 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 MAP2K1Q02750 393 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 MLLT1Q03111 559 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 C1orf141Q5JVX7 400 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 ZNF530Q6P9A1 599 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-210ENST00000582288 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 SCN4AP35499 1836 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 COL15A1P39059 1388 aa8.61□□□□□ -1.03
TVP23B-210ENST00000582288 FER1L6Q2WGJ9 1857 aa8.6□□□□□ -1.03
TVP23B-210ENST00000582288 CCDC88AQ3V6T2 1871 aa8.6□□□□□ -1.03
TVP23B-210ENST00000582288 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-210ENST00000582288 TAOK3Q9H2K8 898 aa8.6□□□□□ -1.03
TVP23B-210ENST00000582288 BCL2L12Q9HB09 334 aa8.6□□□□□ -1.03
TVP23B-210ENST00000582288 DDNO94850 711 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-210ENST00000582288 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
TVP23B-210ENST00000582288 DEFB115Q30KQ5 88 aa8.59□□□□□ -1.03
TVP23B-210ENST00000582288 PNMA8AQ86V59 439 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-210ENST00000582288 TAF1DQ9H5J8 278 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-210ENST00000582288 A0A087WZG4 1122 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 C21orf2O43822 256 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 STYK1Q6J9G0 422 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 CNKSR1Q969H4 720 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 SCN11AQ9UI33 1791 aa8.58□□□□□ -1.04
TVP23B-210ENST00000582288 MRC1P22897 1456 aa8.57□□□□□ -1.04
TVP23B-210ENST00000582288 EIF5P55010 431 aaKnown RBP8.57□□□□□ -1.04
TVP23B-210ENST00000582288 AKAP4Q5JQC9 854 aa8.57□□□□□ -1.04
TVP23B-210ENST00000582288 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
TVP23B-210ENST00000582288 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
TVP23B-210ENST00000582288 CARMIL3Q8ND23 1372 aa8.57□□□□□ -1.04
TVP23B-210ENST00000582288 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
TVP23B-210ENST00000582288 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
TVP23B-210ENST00000582288 SRGNP10124 158 aa8.56□□□□□ -1.04
TVP23B-210ENST00000582288 ECE1P42892 770 aa8.56□□□□□ -1.04
TVP23B-210ENST00000582288 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
TVP23B-210ENST00000582288 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
TVP23B-210ENST00000582288 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
TVP23B-210ENST00000582288 CA12O43570 354 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 STARD3NLO95772 234 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 PRR5LQ6MZQ0 368 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 CNTROBQ8N137 903 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 MASTLQ96GX5 879 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 ZBTB47Q9UFB7 747 aaPredicted RBP8.55□□□□□ -1.04
TVP23B-210ENST00000582288 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
TVP23B-210ENST00000582288 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
TVP23B-210ENST00000582288 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 EPHX2P34913 555 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 MAP2K2P36507 400 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms