RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 TEFQ10587 303 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 STYK1Q6J9G0 422 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
CDK12-207ENST00000581963 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 THSD7BQ9C0I4 1608 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 CEMIPQ8WUJ3 1361 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 LTBP1Q14766 1721 aa8.31□□□□□ -1.08
CDK12-207ENST00000581963 GNAT3A8MTJ3 354 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 FOXN1O15353 648 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 PER1O15534 1290 aaPredicted RBP8.3□□□□□ -1.08
CDK12-207ENST00000581963 KCNQ3O43525 872 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 CNKSR1Q969H4 720 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 MASTLQ96GX5 879 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
CDK12-207ENST00000581963 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
CDK12-207ENST00000581963 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
CDK12-207ENST00000581963 ZNF541Q9H0D2 1346 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 PIP4K2AP48426 406 aaPredicted RBP8.29□□□□□ -1.08
CDK12-207ENST00000581963 ST5P78524 1137 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
CDK12-207ENST00000581963 SOGA3Q5TF21 947 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 SETDB2Q96T68 719 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 TAF1DQ9H5J8 278 aaPredicted RBP8.29□□□□□ -1.08
CDK12-207ENST00000581963 COL4A5P29400 1685 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
CDK12-207ENST00000581963 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
CDK12-207ENST00000581963 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
CDK12-207ENST00000581963 U2SURPO15042 1029 aaKnown RBP8.28□□□□□ -1.08
CDK12-207ENST00000581963 ITGBL1O95965 494 aaPredicted RBP8.28□□□□□ -1.08
CDK12-207ENST00000581963 VEGFBP49765 207 aa8.28□□□□□ -1.08
CDK12-207ENST00000581963 OLFM4Q6UX06 510 aa8.28□□□□□ -1.08
CDK12-207ENST00000581963 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
CDK12-207ENST00000581963 USP16Q9Y5T5 823 aa8.28□□□□□ -1.08
CDK12-207ENST00000581963 LAMB2P55268 1798 aa8.27□□□□□ -1.08
CDK12-207ENST00000581963 NPC1L1Q9UHC9 1359 aa8.27□□□□□ -1.09
CDK12-207ENST00000581963 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
CDK12-207ENST00000581963 NPHP1O15259 732 aa8.27□□□□□ -1.09
CDK12-207ENST00000581963 CCDC93Q567U6 631 aa8.27□□□□□ -1.09
CDK12-207ENST00000581963 NBPF5PQ86XG9 351 aaPredicted RBP8.27□□□□□ -1.09
CDK12-207ENST00000581963 PHACTR3Q96KR7 559 aa8.27□□□□□ -1.09
CDK12-207ENST00000581963 PRDM10Q9NQV6 1147 aa8.27□□□□□ -1.09
CDK12-207ENST00000581963 ZNF277Q9NRM2 450 aaPredicted RBP8.27□□□□□ -1.09
CDK12-207ENST00000581963 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 BTBD11A6QL63 1104 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 NPR1P16066 1061 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 CTCFP49711 727 aaPredicted RBP8.26□□□□□ -1.09
CDK12-207ENST00000581963 FKBP4Q02790 459 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDK12-207ENST00000581963 EAPPQ56P03 285 aaPredicted RBP8.26□□□□□ -1.09
CDK12-207ENST00000581963 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 NPM2Q86SE8 214 aaKnown RBP8.26□□□□□ -1.09
CDK12-207ENST00000581963 WBP1LQ9NX94 342 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 HACL1Q9UJ83 578 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 RNF123Q5XPI4 1314 aa8.26□□□□□ -1.09
CDK12-207ENST00000581963 ANKRD36CQ5JPF3 1778 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 NBPF26B4DH59 902 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 FZD9O00144 591 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 PRKAR2BP31323 418 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 EPHX2P34913 555 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
CDK12-207ENST00000581963 NBPF15Q8N660 670 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 RSPH6AQ9H0K4 717 aa8.25□□□□□ -1.09
CDK12-207ENST00000581963 ABCC12Q96J65 1359 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 TAF1P21675 1872 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 RASSF10A6NK89 507 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 HSPA8P11142 646 aaKnown RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 LBX1P52954 281 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 CNGB1Q14028 1251 aaPredicted RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 RTKN2Q8IZC4 609 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 AIDAQ96BJ3 306 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 NIP7Q9Y221 180 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDK12-207ENST00000581963 CLEC11AQ9Y240 323 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 ZNF652Q9Y2D9 606 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 POLR2AP24928 1970 aaKnown RBP8.24□□□□□ -1.09
CDK12-207ENST00000581963 PDE4DIPQ5VU43 2346 aa8.24□□□□□ -1.09
CDK12-207ENST00000581963 RIC1Q4ADV7 1423 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 RGL2O15211 777 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 HLFQ16534 295 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 DEFB115Q30KQ5 88 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 MCM10Q7L590 875 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
CDK12-207ENST00000581963 CNTROBQ8N137 903 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 GPC2Q8N158 579 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 SYNE4Q8N205 404 aa8.23□□□□□ -1.09
CDK12-207ENST00000581963 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
CDK12-207ENST00000581963 ALDH1B1P30837 517 aa8.22□□□□□ -1.09
CDK12-207ENST00000581963 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDK12-207ENST00000581963 DCTN1Q14203 1278 aa8.22□□□□□ -1.09
CDK12-207ENST00000581963 CRY2Q49AN0 593 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms