RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 PRIM1P49642 420 aaKnown RBP9.43□□□□□ -0.9
SENP3-205ENST00000581010 KCNQ4P56696 695 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 AAMPQ13685 434 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 MSL1Q68DK7 614 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
SENP3-205ENST00000581010 HYPKQ9NX55 129 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 CHPF2Q9P2E5 772 aa9.43□□□□□ -0.9
SENP3-205ENST00000581010 LY75O60449 1722 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
SENP3-205ENST00000581010 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
SENP3-205ENST00000581010 FLIIQ13045 1269 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 TMEM57Q8N5G2 664 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 PIGBQ92521 554 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 NMRK2Q9NPI5 230 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 TFCP2L1Q9NZI6 479 aa9.42□□□□□ -0.9
SENP3-205ENST00000581010 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
SENP3-205ENST00000581010 MSH5O43196 834 aa9.41□□□□□ -0.9
SENP3-205ENST00000581010 MYL6BP14649 208 aa9.41□□□□□ -0.9
SENP3-205ENST00000581010 CCT4P50991 539 aaKnown RBP9.41□□□□□ -0.9
SENP3-205ENST00000581010 SMARCC1Q92922 1105 aaPredicted RBP9.41□□□□□ -0.9
SENP3-205ENST00000581010 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
SENP3-205ENST00000581010 TNNQ9UQP3 1299 aa9.41□□□□□ -0.9
SENP3-205ENST00000581010 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
SENP3-205ENST00000581010 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.9
SENP3-205ENST00000581010 ABCC4O15439 1325 aa9.4□□□□□ -0.9
SENP3-205ENST00000581010 STARD3NLO95772 234 aa9.4□□□□□ -0.9
SENP3-205ENST00000581010 RLBP1P12271 317 aa9.4□□□□□ -0.9
SENP3-205ENST00000581010 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.9
SENP3-205ENST00000581010 DDX21Q9NR30 783 aaKnown RBP eCLIP9.4□□□□□ -0.9
SENP3-205ENST00000581010 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.9
SENP3-205ENST00000581010 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
SENP3-205ENST00000581010 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 ANXA1P04083 346 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 G2E3Q7L622 706 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 ATG3Q9NT62 314 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
SENP3-205ENST00000581010 PALLDQ8WX93 1383 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 AFDNP55196 1824 aaKnown RBP9.38□□□□□ -0.91
SENP3-205ENST00000581010 F6X3S4 739 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 NEXNQ0ZGT2 675 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 RBM46Q8TBY0 533 aaKnown RBP9.38□□□□□ -0.91
SENP3-205ENST00000581010 PHAXQ9H814 394 aaKnown RBP9.38□□□□□ -0.91
SENP3-205ENST00000581010 CD2APQ9Y5K6 639 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 USP16Q9Y5T5 823 aa9.38□□□□□ -0.91
SENP3-205ENST00000581010 TJP1Q07157 1748 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 INTS3Q68E01 1043 aaKnown RBP9.37□□□□□ -0.91
SENP3-205ENST00000581010 KIF6Q6ZMV9 814 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
SENP3-205ENST00000581010 DNAAF4Q8WXU2 420 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 SRCIN1Q9C0H9 1055 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 RWDD1Q9H446 243 aaPredicted RBP9.37□□□□□ -0.91
SENP3-205ENST00000581010 ARFGEF2Q9Y6D5 1785 aa9.37□□□□□ -0.91
SENP3-205ENST00000581010 PI4KAP2A4QPH2 592 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
SENP3-205ENST00000581010 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 KSR2Q6VAB6 950 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
SENP3-205ENST00000581010 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 PI4KAP1Q8N8J0 262 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 MAP3K2Q9Y2U5 619 aa9.36□□□□□ -0.91
SENP3-205ENST00000581010 TAF1LQ8IZX4 1826 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 GNAI3P08754 354 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 SIK1P57059 783 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 C16orf71Q8IYS4 520 aaPredicted RBP9.35□□□□□ -0.91
SENP3-205ENST00000581010 KIAA1551Q9HCM1 1747 aa9.35□□□□□ -0.91
SENP3-205ENST00000581010 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
SENP3-205ENST00000581010 TNRC6CQ9HCJ0 1690 aaKnown RBP9.35□□□□□ -0.91
SENP3-205ENST00000581010 A1BGP04217 495 aa9.34□□□□□ -0.91
SENP3-205ENST00000581010 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
SENP3-205ENST00000581010 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
SENP3-205ENST00000581010 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
SENP3-205ENST00000581010 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
SENP3-205ENST00000581010 ZNF831Q5JPB2 1677 aa9.34□□□□□ -0.91
SENP3-205ENST00000581010 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.92
SENP3-205ENST00000581010 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
SENP3-205ENST00000581010 HMMRO75330 724 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 GNAI2P04899 355 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 HMGB2P26583 209 aaKnown RBP9.33□□□□□ -0.92
SENP3-205ENST00000581010 FSTL1Q12841 308 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 PDIA6Q15084 440 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 PLBD2Q8NHP8 589 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 MYD88Q99836 296 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 CCDC87Q9NVE4 849 aa9.33□□□□□ -0.92
SENP3-205ENST00000581010 CCNL1Q9UK58 526 aaPredicted RBP9.33□□□□□ -0.92
SENP3-205ENST00000581010 ALDH1L1O75891 902 aa9.32□□□□□ -0.92
SENP3-205ENST00000581010 CYP19A1P11511 503 aaPredicted RBP9.32□□□□□ -0.92
SENP3-205ENST00000581010 LINS1Q8NG48 757 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms