RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 CNKSR1Q969H4 720 aa27.69■■■□□ 2.02
SNX11-207ENST00000580875 ZNF219Q9P2Y4 722 aaPredicted RBP27.69■■■□□ 2.02
SNX11-207ENST00000580875 ZNF652Q9Y2D9 606 aa27.69■■■□□ 2.02
SNX11-207ENST00000580875 TIAM2Q8IVF5 1701 aa27.69■■■□□ 2.02
SNX11-207ENST00000580875 STYK1Q6J9G0 422 aa27.68■■■□□ 2.02
SNX11-207ENST00000580875 SRGNP10124 158 aa27.67■■■□□ 2.02
SNX11-207ENST00000580875 HTRA3P83110 453 aa27.66■■■□□ 2.02
SNX11-207ENST00000580875 TAF7Q15545 349 aaPredicted RBP27.66■■■□□ 2.02
SNX11-207ENST00000580875 NBPF5PQ86XG9 351 aaPredicted RBP27.66■■■□□ 2.02
SNX11-207ENST00000580875 MASTLQ96GX5 879 aa27.66■■■□□ 2.02
SNX11-207ENST00000580875 ERFEQ4G0M1 354 aa27.65■■■□□ 2.02
SNX11-207ENST00000580875 DPY19L2Q6NUT2 758 aa27.65■■■□□ 2.02
SNX11-207ENST00000580875 PRPF40BQ6NWY9 871 aaKnown RBP27.65■■■□□ 2.02
SNX11-207ENST00000580875 NBPF26B4DH59 902 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 RGL2O15211 777 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 NEFMP07197 916 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 NBPF10Q6P3W6 841 aaKnown RBP27.64■■■□□ 2.02
SNX11-207ENST00000580875 NBPF15Q8N660 670 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 KLRG1Q96E93 195 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 TAOK3Q9H2K8 898 aa27.64■■■□□ 2.02
SNX11-207ENST00000580875 LTBP3Q9NS15 1303 aa27.64■■■□□ 2.01
SNX11-207ENST00000580875 SOGA3Q5TF21 947 aa27.63■■■□□ 2.01
SNX11-207ENST00000580875 CCDC88AQ3V6T2 1871 aa27.63■■■□□ 2.01
SNX11-207ENST00000580875 FER1L6Q2WGJ9 1857 aa27.62■■■□□ 2.01
SNX11-207ENST00000580875 MIS18AQ9NYP9 233 aa27.61■■■□□ 2.01
SNX11-207ENST00000580875 TPTE2Q6XPS3 522 aa27.6■■■□□ 2.01
SNX11-207ENST00000580875 NIP7Q9Y221 180 aaKnown RBP eCLIP27.6■■■□□ 2.01
SNX11-207ENST00000580875 POTECB2RU33 542 aa27.59■■■□□ 2.01
SNX11-207ENST00000580875 JMYQ8N9B5 988 aa27.59■■■□□ 2.01
SNX11-207ENST00000580875 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
SNX11-207ENST00000580875 SLX4Q8IY92 1834 aa27.59■■■□□ 2.01
SNX11-207ENST00000580875 KLRG2A4D1S0 409 aaPredicted RBP27.58■■■□□ 2.01
SNX11-207ENST00000580875 NPR1P16066 1061 aa27.58■■■□□ 2.01
SNX11-207ENST00000580875 ARFGEF2Q9Y6D5 1785 aa27.58■■■□□ 2
SNX11-207ENST00000580875 PLEKHF1Q96S99 279 aa27.56■■■□□ 2
SNX11-207ENST00000580875 DICER1Q9UPY3 1922 aaKnown RBP27.56■■■□□ 2
SNX11-207ENST00000580875 HLFQ16534 295 aa27.55■■■□□ 2
SNX11-207ENST00000580875 C7orf43Q8WVR3 580 aa27.55■■■□□ 2
SNX11-207ENST00000580875 LAMB4A4D0S4 1761 aa27.55■■■□□ 2
SNX11-207ENST00000580875 CCDC93Q567U6 631 aa27.54■■■□□ 2
SNX11-207ENST00000580875 CACNA1SQ13698 1873 aa27.53■■■□□ 2
SNX11-207ENST00000580875 FAM177BA6PVY3 158 aa27.53■■■□□ 2
SNX11-207ENST00000580875 NFE2L2Q16236 605 aa27.53■■■□□ 2
SNX11-207ENST00000580875 PNNQ9H307 717 aaKnown RBP27.53■■■□□ 2
SNX11-207ENST00000580875 EIF4A1P60842 406 aaKnown RBP27.52■■■□□ 2
SNX11-207ENST00000580875 KDM3BQ7LBC6 1761 aa27.51■■□□□ 1.99
SNX11-207ENST00000580875 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
SNX11-207ENST00000580875 GTF2E1P29083 439 aaPredicted RBP27.51■■□□□ 1.99
SNX11-207ENST00000580875 MAPK8IP3Q9UPT6 1336 aa27.5■■□□□ 1.99
SNX11-207ENST00000580875 DLG5Q8TDM6 1919 aa27.5■■□□□ 1.99
SNX11-207ENST00000580875 ERVV-1B6SEH8 477 aa27.5■■□□□ 1.99
SNX11-207ENST00000580875 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
SNX11-207ENST00000580875 THUMPD2Q9BTF0 503 aaKnown RBP27.5■■□□□ 1.99
SNX11-207ENST00000580875 ALDH1B1P30837 517 aa27.48■■□□□ 1.99
SNX11-207ENST00000580875 FKBP4Q02790 459 aaKnown RBP eCLIP27.48■■□□□ 1.99
SNX11-207ENST00000580875 NYXQ9GZU5 481 aa27.48■■□□□ 1.99
SNX11-207ENST00000580875 RRP7AQ9Y3A4 280 aaKnown RBP27.48■■□□□ 1.99
SNX11-207ENST00000580875 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
SNX11-207ENST00000580875 KIF6Q6ZMV9 814 aa27.47■■□□□ 1.99
SNX11-207ENST00000580875 RTKN2Q8IZC4 609 aa27.47■■□□□ 1.99
SNX11-207ENST00000580875 IQCA1LA6NCM1 817 aa27.46■■□□□ 1.99
SNX11-207ENST00000580875 CHADLQ6NUI6 762 aa27.46■■□□□ 1.99
SNX11-207ENST00000580875 OLFM4Q6UX06 510 aa27.45■■□□□ 1.98
SNX11-207ENST00000580875 ZNF277Q9NRM2 450 aaPredicted RBP27.45■■□□□ 1.98
SNX11-207ENST00000580875 MYL6BP14649 208 aa27.44■■□□□ 1.98
SNX11-207ENST00000580875 TTLL7Q6ZT98 887 aa27.44■■□□□ 1.98
SNX11-207ENST00000580875 L3MBTL3Q96JM7 780 aaPredicted RBP27.44■■□□□ 1.98
SNX11-207ENST00000580875 CRY2Q49AN0 593 aa27.43■■□□□ 1.98
SNX11-207ENST00000580875 NUTM1Q86Y26 1132 aa27.43■■□□□ 1.98
SNX11-207ENST00000580875 ABCC12Q96J65 1359 aa27.43■■□□□ 1.98
SNX11-207ENST00000580875 PCNTO95613 3336 aa27.42■■□□□ 1.98
SNX11-207ENST00000580875 ERBB4Q15303 1308 aa27.41■■□□□ 1.98
SNX11-207ENST00000580875 IBTKQ9P2D0 1353 aaPredicted RBP27.41■■□□□ 1.98
SNX11-207ENST00000580875 POTEIP0CG38 1075 aa27.41■■□□□ 1.98
SNX11-207ENST00000580875 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
SNX11-207ENST00000580875 ZBTB3Q9H5J0 574 aa27.41■■□□□ 1.98
SNX11-207ENST00000580875 TSPYL4Q9UJ04 414 aa27.41■■□□□ 1.98
SNX11-207ENST00000580875 GPTP24298 496 aa27.4■■□□□ 1.98
SNX11-207ENST00000580875 UBN2Q6ZU65 1347 aa27.4■■□□□ 1.98
SNX11-207ENST00000580875 NUP98P52948 1817 aa27.39■■□□□ 1.98
SNX11-207ENST00000580875 IARSP41252 1262 aaKnown RBP27.39■■□□□ 1.98
SNX11-207ENST00000580875 RALBP1Q15311 655 aa27.39■■□□□ 1.98
SNX11-207ENST00000580875 SYNE4Q8N205 404 aa27.39■■□□□ 1.98
SNX11-207ENST00000580875 TAF1DQ9H5J8 278 aaPredicted RBP27.39■■□□□ 1.98
SNX11-207ENST00000580875 CREBZFQ9NS37 354 aa27.39■■□□□ 1.98
SNX11-207ENST00000580875 RIC1Q4ADV7 1423 aa27.39■■□□□ 1.97
SNX11-207ENST00000580875 ZNF541Q9H0D2 1346 aa27.39■■□□□ 1.97
SNX11-207ENST00000580875 RIPK4P57078 832 aa27.38■■□□□ 1.97
SNX11-207ENST00000580875 COL13A1Q5TAT6 717 aaPredicted RBP27.38■■□□□ 1.97
SNX11-207ENST00000580875 SUSD4Q5VX71 490 aa27.38■■□□□ 1.97
SNX11-207ENST00000580875 LDHDQ86WU2 507 aa27.38■■□□□ 1.97
SNX11-207ENST00000580875 ZNF34Q8IZ26 560 aa27.38■■□□□ 1.97
SNX11-207ENST00000580875 RPGRQ92834 1020 aaKnown RBP27.38■■□□□ 1.97
SNX11-207ENST00000580875 SCN4AP35499 1836 aa27.37■■□□□ 1.97
SNX11-207ENST00000580875 CC2D2BQ6DHV5 1058 aa27.37■■□□□ 1.97
SNX11-207ENST00000580875 PSMD1Q99460 953 aa27.37■■□□□ 1.97
SNX11-207ENST00000580875 FZD9O00144 591 aa27.36■■□□□ 1.97
SNX11-207ENST00000580875 HOXA10P31260 410 aaPredicted RBP27.36■■□□□ 1.97
SNX11-207ENST00000580875 GIGYF2Q6Y7W6 1299 aaKnown RBP27.36■■□□□ 1.97
SNX11-207ENST00000580875 SNED1Q8TER0 1413 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms