RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 EYA1Q99502 592 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
SNX11-206ENST00000580219 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
SNX11-206ENST00000580219 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
SNX11-206ENST00000580219 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
SNX11-206ENST00000580219 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
SNX11-206ENST00000580219 A0A0G2JLW4 131 aa12.55□□□□□ -0.4
SNX11-206ENST00000580219 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
SNX11-206ENST00000580219 SYTL4Q96C24 671 aaPredicted RBP12.55□□□□□ -0.4
SNX11-206ENST00000580219 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
SNX11-206ENST00000580219 CCDC88AQ3V6T2 1871 aa12.55□□□□□ -0.4
SNX11-206ENST00000580219 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
SNX11-206ENST00000580219 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
SNX11-206ENST00000580219 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
SNX11-206ENST00000580219 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
SNX11-206ENST00000580219 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
SNX11-206ENST00000580219 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
SNX11-206ENST00000580219 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
SNX11-206ENST00000580219 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
SNX11-206ENST00000580219 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
SNX11-206ENST00000580219 SOX10P56693 466 aa12.52□□□□□ -0.41
SNX11-206ENST00000580219 TGFB2P61812 414 aa12.52□□□□□ -0.41
SNX11-206ENST00000580219 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
SNX11-206ENST00000580219 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
SNX11-206ENST00000580219 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
SNX11-206ENST00000580219 CHL1O00533 1208 aa12.51□□□□□ -0.41
SNX11-206ENST00000580219 HABP4Q5JVS0 413 aaKnown RBP12.51□□□□□ -0.41
SNX11-206ENST00000580219 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
SNX11-206ENST00000580219 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
SNX11-206ENST00000580219 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
SNX11-206ENST00000580219 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
SNX11-206ENST00000580219 THSD7BQ9C0I4 1608 aa12.51□□□□□ -0.41
SNX11-206ENST00000580219 VAMP4O75379 141 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 DPEP1P16444 411 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 CLCN6P51797 869 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
SNX11-206ENST00000580219 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
SNX11-206ENST00000580219 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
SNX11-206ENST00000580219 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
SNX11-206ENST00000580219 MEGF6O75095 1541 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
SNX11-206ENST00000580219 PHF14O94880 888 aa12.49□□□□□ -0.41
SNX11-206ENST00000580219 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
SNX11-206ENST00000580219 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
SNX11-206ENST00000580219 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
SNX11-206ENST00000580219 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
SNX11-206ENST00000580219 COL6A3P12111 3177 aa12.49□□□□□ -0.41
SNX11-206ENST00000580219 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
SNX11-206ENST00000580219 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 IL2RBP14784 551 aa12.48□□□□□ -0.41
SNX11-206ENST00000580219 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
SNX11-206ENST00000580219 PANK1Q8TE04 598 aa12.48□□□□□ -0.41
SNX11-206ENST00000580219 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
SNX11-206ENST00000580219 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
SNX11-206ENST00000580219 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 POTECB2RU33 542 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 DGKZQ13574 1117 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
SNX11-206ENST00000580219 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
SNX11-206ENST00000580219 ADAMTS7Q9UKP4 1686 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 RLBP1P12271 317 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 TRIM27P14373 513 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
SNX11-206ENST00000580219 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 MCM10Q7L590 875 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.41
SNX11-206ENST00000580219 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.41
SNX11-206ENST00000580219 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SNX11-206ENST00000580219 DDX19BQ9UMR2 479 aa12.46□□□□□ -0.41
SNX11-206ENST00000580219 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
SNX11-206ENST00000580219 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
SNX11-206ENST00000580219 MMP10P09238 476 aa12.45□□□□□ -0.42
SNX11-206ENST00000580219 POTEIP0CG38 1075 aa12.45□□□□□ -0.42
SNX11-206ENST00000580219 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
SNX11-206ENST00000580219 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
SNX11-206ENST00000580219 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
SNX11-206ENST00000580219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
SNX11-206ENST00000580219 RASSF7Q02833 373 aa12.44□□□□□ -0.42
SNX11-206ENST00000580219 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
SNX11-206ENST00000580219 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
SNX11-206ENST00000580219 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
SNX11-206ENST00000580219 AK7Q96M32 723 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms