RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 FAM193AP78312 1265 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
LINC00909-202ENST00000580048 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 FAM135BQ49AJ0 1406 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 LMAN1P49257 510 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
LINC00909-202ENST00000580048 ERBB3P21860 1342 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 MYOM2P54296 1465 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
LINC00909-202ENST00000580048 DHX16O60231 1041 aaKnown RBP12.07□□□□□ -0.48
LINC00909-202ENST00000580048 NEMFO60524 1076 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 H2AFXP16104 143 aaPredicted RBP12.07□□□□□ -0.48
LINC00909-202ENST00000580048 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
LINC00909-202ENST00000580048 PTPRCP08575 1304 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 TTC14Q96N46 770 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 MCM10Q7L590 875 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 NECTIN2Q92692 538 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 TCEANC2Q96MN5 208 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 CLSTN2Q9H4D0 955 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 CWC15Q9P013 229 aaKnown RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 C11orf57Q6ZUT1 292 aaPredicted RBP12.06□□□□□ -0.48
LINC00909-202ENST00000580048 G2E3Q7L622 706 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 GPATCH11Q8N954 259 aa12.06□□□□□ -0.48
LINC00909-202ENST00000580048 CASQ1P31415 396 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 STK3Q13188 491 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 FAM177A1Q8N128 213 aaPredicted RBP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 DNAI1Q9UI46 699 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 LRRC7Q96NW7 1537 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 CCZ1BP86790 482 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 CCZ1P86791 482 aaPredicted RBP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 ME3Q16798 604 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 ADCK5Q3MIX3 580 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 ERCC4Q92889 916 aaPredicted RBP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
LINC00909-202ENST00000580048 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
LINC00909-202ENST00000580048 KIF2AO00139 706 aaPredicted RBP12.04□□□□□ -0.48
LINC00909-202ENST00000580048 FOSBP53539 338 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 GOLGA6L1Q8N7Z2 621 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 SMC2O95347 1197 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
LINC00909-202ENST00000580048 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
LINC00909-202ENST00000580048 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 SGSM2O43147 1006 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
LINC00909-202ENST00000580048 AK7Q96M32 723 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 APPP05067 770 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 SMC1AQ14683 1233 aaKnown RBP12.03□□□□□ -0.48
LINC00909-202ENST00000580048 MRFAP1L1Q96HT8 127 aa12.03□□□□□ -0.48
LINC00909-202ENST00000580048 RRP15Q9Y3B9 282 aaKnown RBP12.03□□□□□ -0.48
LINC00909-202ENST00000580048 NOP2P46087 812 aaKnown RBP12.02□□□□□ -0.48
LINC00909-202ENST00000580048 DDX11Q96FC9 970 aa12.02□□□□□ -0.48
LINC00909-202ENST00000580048 PPP1R13BQ96KQ4 1090 aa12.02□□□□□ -0.48
LINC00909-202ENST00000580048 CARD6Q9BX69 1037 aa12.02□□□□□ -0.48
LINC00909-202ENST00000580048 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.48
LINC00909-202ENST00000580048 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 NRDCO43847 1150 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 CDC25BP30305 580 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 ICE2Q659A1 982 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 TMC6Q7Z403 805 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 AOPEPQ8N6M6 819 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 ZSCAN31Q96LW9 406 aaPredicted RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 LSG1Q9H089 658 aaKnown RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 ORC3Q9UBD5 711 aaPredicted RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 KIAA1210Q9ULL0 1709 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 QRICH2Q9H0J4 1663 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
LINC00909-202ENST00000580048 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
LINC00909-202ENST00000580048 ANKRD65E5RJM6 399 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
LINC00909-202ENST00000580048 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
LINC00909-202ENST00000580048 GGT6Q6P531 493 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 SALL3Q9BXA9 1300 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 PDCP20941 246 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00909-202ENST00000580048 SKIDA1Q1XH10 827 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 PGBD1Q96JS3 809 aa12.01□□□□□ -0.49
LINC00909-202ENST00000580048 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms