RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
KPNB1-208ENST00000580019 OGFOD2Q6N063 350 aa6.34□□□□□ -1.39
KPNB1-208ENST00000580019 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
KPNB1-208ENST00000580019 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
KPNB1-208ENST00000580019 C8AP07357 584 aa6.33□□□□□ -1.4
KPNB1-208ENST00000580019 NOS3P29474 1203 aa6.33□□□□□ -1.4
KPNB1-208ENST00000580019 CCER1Q8TC90 406 aaPredicted RBP6.33□□□□□ -1.4
KPNB1-208ENST00000580019 MEGF10Q96KG7 1140 aa6.33□□□□□ -1.4
KPNB1-208ENST00000580019 AK7Q96M32 723 aa6.33□□□□□ -1.4
KPNB1-208ENST00000580019 PTCD1O75127 700 aaKnown RBP6.31□□□□□ -1.4
KPNB1-208ENST00000580019 ZC3H15Q8WU90 426 aaKnown RBP6.31□□□□□ -1.4
KPNB1-208ENST00000580019 SLC30A3Q99726 388 aa6.31□□□□□ -1.4
KPNB1-208ENST00000580019 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
KPNB1-208ENST00000580019 SKIV2LQ15477 1246 aaKnown RBP6.3□□□□□ -1.4
KPNB1-208ENST00000580019 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
KPNB1-208ENST00000580019 POU5F2Q8N7G0 328 aa6.3□□□□□ -1.4
KPNB1-208ENST00000580019 CDCA7Q9BWT1 371 aaPredicted RBP6.3□□□□□ -1.4
KPNB1-208ENST00000580019 TRIM34Q9BYJ4 488 aa6.3□□□□□ -1.4
KPNB1-208ENST00000580019 JPH1Q9HDC5 661 aaPredicted RBP6.3□□□□□ -1.4
KPNB1-208ENST00000580019 GSC2O15499 205 aa6.29□□□□□ -1.4
KPNB1-208ENST00000580019 STAU1O95793 577 aaKnown RBP6.29□□□□□ -1.4
KPNB1-208ENST00000580019 PDE4DQ08499 809 aa6.29□□□□□ -1.4
KPNB1-208ENST00000580019 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
KPNB1-208ENST00000580019 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.29□□□□□ -1.4
KPNB1-208ENST00000580019 ADAMTS4O75173 837 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 SPINK2P20155 84 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 SPEM2Q0P670 501 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 NR1H3Q13133 447 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 DTWD1Q8N5C7 304 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
KPNB1-208ENST00000580019 TGFB1P01137 390 aa6.27□□□□□ -1.41
KPNB1-208ENST00000580019 SFSWAPQ12872 951 aaKnown RBP6.27□□□□□ -1.41
KPNB1-208ENST00000580019 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
KPNB1-208ENST00000580019 ILDR2Q71H61 639 aa6.27□□□□□ -1.41
KPNB1-208ENST00000580019 PROCA1Q8NCQ7 364 aaPredicted RBP6.27□□□□□ -1.41
KPNB1-208ENST00000580019 CCDC85AQ96PX6 553 aaPredicted RBP6.27□□□□□ -1.41
KPNB1-208ENST00000580019 GRIK1P39086 918 aa6.26□□□□□ -1.41
KPNB1-208ENST00000580019 AFF1P51825 1210 aaKnown RBP6.26□□□□□ -1.41
KPNB1-208ENST00000580019 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
KPNB1-208ENST00000580019 FBXO11Q86XK2 927 aa6.26□□□□□ -1.41
KPNB1-208ENST00000580019 WNT11O96014 354 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 SMTNP53814 917 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 USP4Q13107 963 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 DZIP1LQ8IYY4 767 aaKnown RBP6.25□□□□□ -1.41
KPNB1-208ENST00000580019 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 NUDT8Q8WV74 236 aa6.25□□□□□ -1.41
KPNB1-208ENST00000580019 INHAP05111 366 aa6.24□□□□□ -1.41
KPNB1-208ENST00000580019 PLCB2Q00722 1185 aa6.24□□□□□ -1.41
KPNB1-208ENST00000580019 SH3D19Q5HYK7 790 aa6.24□□□□□ -1.41
KPNB1-208ENST00000580019 RAB44Q7Z6P3 723 aaPredicted RBP6.24□□□□□ -1.41
KPNB1-208ENST00000580019 BCANQ96GW7 911 aa6.24□□□□□ -1.41
KPNB1-208ENST00000580019 GDF10P55107 478 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 LRRC69Q6ZNQ3 347 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 DTX1Q86Y01 620 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 CABP1Q9NZU7 370 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 SLC6A14Q9UN76 642 aa6.23□□□□□ -1.41
KPNB1-208ENST00000580019 CDK2AP1O14519 115 aa6.22□□□□□ -1.41
KPNB1-208ENST00000580019 SCNN1DP51172 638 aa6.22□□□□□ -1.41
KPNB1-208ENST00000580019 TBC1D8BQ0IIM8 1120 aa6.22□□□□□ -1.41
KPNB1-208ENST00000580019 UBE2OQ9C0C9 1292 aaKnown RBP6.22□□□□□ -1.41
KPNB1-208ENST00000580019 PSAPL1Q6NUJ1 521 aa6.21□□□□□ -1.42
KPNB1-208ENST00000580019 ASIC4Q96FT7 647 aa6.21□□□□□ -1.42
KPNB1-208ENST00000580019 AKTIPQ9H8T0 292 aa6.21□□□□□ -1.42
KPNB1-208ENST00000580019 RAXQ9Y2V3 346 aa6.21□□□□□ -1.42
KPNB1-208ENST00000580019 RGS9O75916 674 aaPredicted RBP6.2□□□□□ -1.42
KPNB1-208ENST00000580019 MSL1Q68DK7 614 aa6.2□□□□□ -1.42
KPNB1-208ENST00000580019 SPOCD1Q6ZMY3 1216 aa6.2□□□□□ -1.42
KPNB1-208ENST00000580019 SIRT1Q96EB6 747 aa6.2□□□□□ -1.42
KPNB1-208ENST00000580019 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
KPNB1-208ENST00000580019 IQSEC3Q9UPP2 1182 aaPredicted RBP6.2□□□□□ -1.42
KPNB1-208ENST00000580019 DOLKQ9UPQ8 538 aa6.2□□□□□ -1.42
KPNB1-208ENST00000580019 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
KPNB1-208ENST00000580019 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
KPNB1-208ENST00000580019 GPC6Q9Y625 555 aaPredicted RBP6.19□□□□□ -1.42
KPNB1-208ENST00000580019 TXLNAP40222 546 aa6.18□□□□□ -1.42
KPNB1-208ENST00000580019 BHMTQ93088 406 aa6.18□□□□□ -1.42
KPNB1-208ENST00000580019 A6NJY4 79 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 RFC5P40937 340 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 MTFR1Q15390 333 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 GJD4Q96KN9 370 aaPredicted RBP6.17□□□□□ -1.42
KPNB1-208ENST00000580019 SLC4A9Q96Q91 983 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 IGFLR1Q9H665 355 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 PARP3Q9Y6F1 533 aa6.17□□□□□ -1.42
KPNB1-208ENST00000580019 PRKCSHP14314 528 aaPredicted RBP6.16□□□□□ -1.42
KPNB1-208ENST00000580019 HAP1P54257 671 aaPredicted RBP6.16□□□□□ -1.42
KPNB1-208ENST00000580019 KCNQ4P56696 695 aa6.16□□□□□ -1.42
KPNB1-208ENST00000580019 TMEM130Q8N3G9 435 aa6.16□□□□□ -1.42
KPNB1-208ENST00000580019 BRD7Q9NPI1 651 aa6.16□□□□□ -1.42
KPNB1-208ENST00000580019 KCNH4Q9UQ05 1017 aa6.16□□□□□ -1.42
KPNB1-208ENST00000580019 USP3Q9Y6I4 520 aa6.16□□□□□ -1.42
KPNB1-208ENST00000580019 EML1O00423 815 aa6.15□□□□□ -1.42
KPNB1-208ENST00000580019 ALX3O95076 343 aa6.15□□□□□ -1.42
KPNB1-208ENST00000580019 WFDC8Q8IUA0 241 aa6.15□□□□□ -1.42
KPNB1-208ENST00000580019 ABI1Q8IZP0 508 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms