RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
MSI2-208ENST00000579466 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
MSI2-208ENST00000579466 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
MSI2-208ENST00000579466 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
MSI2-208ENST00000579466 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
MSI2-208ENST00000579466 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
MSI2-208ENST00000579466 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
MSI2-208ENST00000579466 DDNO94850 711 aaPredicted RBP12.91□□□□□ -0.34
MSI2-208ENST00000579466 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
MSI2-208ENST00000579466 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
MSI2-208ENST00000579466 MCM10Q7L590 875 aa12.9□□□□□ -0.34
MSI2-208ENST00000579466 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
MSI2-208ENST00000579466 CNKSR1Q969H4 720 aa12.9□□□□□ -0.34
MSI2-208ENST00000579466 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
MSI2-208ENST00000579466 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
MSI2-208ENST00000579466 SRGNP10124 158 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
MSI2-208ENST00000579466 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
MSI2-208ENST00000579466 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
MSI2-208ENST00000579466 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
MSI2-208ENST00000579466 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
MSI2-208ENST00000579466 LAMB4A4D0S4 1761 aa12.88□□□□□ -0.35
MSI2-208ENST00000579466 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
MSI2-208ENST00000579466 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
MSI2-208ENST00000579466 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
MSI2-208ENST00000579466 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
MSI2-208ENST00000579466 EAPPQ56P03 285 aaPredicted RBP12.87□□□□□ -0.35
MSI2-208ENST00000579466 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
MSI2-208ENST00000579466 SCN4AP35499 1836 aa12.87□□□□□ -0.35
MSI2-208ENST00000579466 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
MSI2-208ENST00000579466 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
MSI2-208ENST00000579466 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
MSI2-208ENST00000579466 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
MSI2-208ENST00000579466 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
MSI2-208ENST00000579466 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
MSI2-208ENST00000579466 SNRPA1P09661 255 aaKnown RBP12.85□□□□□ -0.35
MSI2-208ENST00000579466 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
MSI2-208ENST00000579466 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
MSI2-208ENST00000579466 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
MSI2-208ENST00000579466 IQCA1LA6NCM1 817 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 NPR1P16066 1061 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
MSI2-208ENST00000579466 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
MSI2-208ENST00000579466 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
MSI2-208ENST00000579466 NUP98P52948 1817 aa12.83□□□□□ -0.35
MSI2-208ENST00000579466 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
MSI2-208ENST00000579466 HLFQ16534 295 aa12.83□□□□□ -0.36
MSI2-208ENST00000579466 TAF1DQ9H5J8 278 aaPredicted RBP12.83□□□□□ -0.36
MSI2-208ENST00000579466 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
MSI2-208ENST00000579466 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 CLEC4GQ6UXB4 293 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
MSI2-208ENST00000579466 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 FOXN1O15353 648 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 HACL1Q9UJ83 578 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 PASKQ96RG2 1323 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
MSI2-208ENST00000579466 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
MSI2-208ENST00000579466 GPTP24298 496 aa12.8□□□□□ -0.36
MSI2-208ENST00000579466 EPHX2P34913 555 aa12.8□□□□□ -0.36
MSI2-208ENST00000579466 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
MSI2-208ENST00000579466 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
MSI2-208ENST00000579466 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
MSI2-208ENST00000579466 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
MSI2-208ENST00000579466 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
MSI2-208ENST00000579466 MYL6BP14649 208 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 VEGFBP49765 207 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 RTKN2Q8IZC4 609 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 AIDAQ96BJ3 306 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
MSI2-208ENST00000579466 COL4A5P29400 1685 aa12.79□□□□□ -0.36
MSI2-208ENST00000579466 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
MSI2-208ENST00000579466 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
MSI2-208ENST00000579466 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
MSI2-208ENST00000579466 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
MSI2-208ENST00000579466 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
MSI2-208ENST00000579466 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
MSI2-208ENST00000579466 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
MSI2-208ENST00000579466 NEFMP07197 916 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 ALDH1B1P30837 517 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 GRM1Q13255 1194 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
MSI2-208ENST00000579466 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
MSI2-208ENST00000579466 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
MSI2-208ENST00000579466 CNTROBQ8N137 903 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms