RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 ANKRD31Q8N7Z5 1873 aa16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 SRGNP10124 158 aa16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
CDK5RAP3-212ENST00000579175 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
CDK5RAP3-212ENST00000579175 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
CDK5RAP3-212ENST00000579175 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
CDK5RAP3-212ENST00000579175 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
CDK5RAP3-212ENST00000579175 LTBP3Q9NS15 1303 aa16.86■□□□□ 0.29
CDK5RAP3-212ENST00000579175 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 FER1L6Q2WGJ9 1857 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
CDK5RAP3-212ENST00000579175 COL11A2P13942 1736 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 CCDC93Q567U6 631 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 TPTE2Q6XPS3 522 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 MCM10Q7L590 875 aa16.84■□□□□ 0.29
CDK5RAP3-212ENST00000579175 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 NPR1P16066 1061 aa16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.286e-9■■■□□ 17
CDK5RAP3-212ENST00000579175 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
CDK5RAP3-212ENST00000579175 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-212ENST00000579175 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
CDK5RAP3-212ENST00000579175 NPC1L1Q9UHC9 1359 aa16.81■□□□□ 0.28
CDK5RAP3-212ENST00000579175 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
CDK5RAP3-212ENST00000579175 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-212ENST00000579175 FKBP4Q02790 459 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDK5RAP3-212ENST00000579175 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
CDK5RAP3-212ENST00000579175 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
CDK5RAP3-212ENST00000579175 TAF1DQ9H5J8 278 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-212ENST00000579175 ALDH1B1P30837 517 aa16.79■□□□□ 0.28
CDK5RAP3-212ENST00000579175 RTKN2Q8IZC4 609 aa16.79■□□□□ 0.28
CDK5RAP3-212ENST00000579175 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
CDK5RAP3-212ENST00000579175 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
CDK5RAP3-212ENST00000579175 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
CDK5RAP3-212ENST00000579175 HACL1Q9UJ83 578 aa16.78■□□□□ 0.28
CDK5RAP3-212ENST00000579175 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
CDK5RAP3-212ENST00000579175 TMEM88BA6NKF7 163 aa16.77■□□□□ 0.28
CDK5RAP3-212ENST00000579175 NEFMP07197 916 aa16.77■□□□□ 0.28
CDK5RAP3-212ENST00000579175 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
CDK5RAP3-212ENST00000579175 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-212ENST00000579175 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 EPHX2P34913 555 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 HLFQ16534 295 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 CNTNAP1P78357 1384 aa16.76■□□□□ 0.27
CDK5RAP3-212ENST00000579175 ARFGEF2Q9Y6D5 1785 aa16.75■□□□□ 0.27
CDK5RAP3-212ENST00000579175 FOXN1O15353 648 aa16.75■□□□□ 0.27
CDK5RAP3-212ENST00000579175 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-212ENST00000579175 PCNTO95613 3336 aa16.75■□□□□ 0.27
CDK5RAP3-212ENST00000579175 SCN4AP35499 1836 aa16.75■□□□□ 0.27
CDK5RAP3-212ENST00000579175 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 KLRG2A4D1S0 409 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 VEGFBP49765 207 aa16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
CDK5RAP3-212ENST00000579175 ITGBL1O95965 494 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-212ENST00000579175 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-212ENST00000579175 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
CDK5RAP3-212ENST00000579175 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
CDK5RAP3-212ENST00000579175 NYXQ9GZU5 481 aa16.73■□□□□ 0.27
CDK5RAP3-212ENST00000579175 RGL2O15211 777 aa16.72■□□□□ 0.27
CDK5RAP3-212ENST00000579175 CTCFP49711 727 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-212ENST00000579175 EIF6P56537 245 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-212ENST00000579175 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
CDK5RAP3-212ENST00000579175 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-212ENST00000579175 FZD9O00144 591 aa16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 MYL6BP14649 208 aa16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 GPC2Q8N158 579 aa16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 ABT1Q9ULW3 272 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-212ENST00000579175 GPTP24298 496 aa16.7■□□□□ 0.26
CDK5RAP3-212ENST00000579175 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-212ENST00000579175 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms