RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
BRIP1-204ENST00000579028 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
BRIP1-204ENST00000579028 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
BRIP1-204ENST00000579028 SRGNP10124 158 aa11.86□□□□□ -0.51
BRIP1-204ENST00000579028 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
BRIP1-204ENST00000579028 ADAMTSL1Q8N6G6 1762 aa11.86□□□□□ -0.51
BRIP1-204ENST00000579028 LBX1P52954 281 aa11.85□□□□□ -0.51
BRIP1-204ENST00000579028 POLA2Q14181 598 aa11.85□□□□□ -0.51
BRIP1-204ENST00000579028 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
BRIP1-204ENST00000579028 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
BRIP1-204ENST00000579028 TIMELESSQ9UNS1 1208 aa11.85□□□□□ -0.51
BRIP1-204ENST00000579028 HEG1Q9ULI3 1381 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 RASSF10A6NK89 507 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
BRIP1-204ENST00000579028 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 MASTLQ96GX5 879 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 TEX13AQ9BXU3 409 aaPredicted RBP11.84□□□□□ -0.51
BRIP1-204ENST00000579028 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
BRIP1-204ENST00000579028 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
BRIP1-204ENST00000579028 HMOX1P09601 288 aa11.83□□□□□ -0.52
BRIP1-204ENST00000579028 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
BRIP1-204ENST00000579028 ST5P78524 1137 aa11.83□□□□□ -0.52
BRIP1-204ENST00000579028 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
BRIP1-204ENST00000579028 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.52
BRIP1-204ENST00000579028 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
BRIP1-204ENST00000579028 SIPA1L3O60292 1781 aaPredicted RBP11.82□□□□□ -0.52
BRIP1-204ENST00000579028 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
BRIP1-204ENST00000579028 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
BRIP1-204ENST00000579028 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
BRIP1-204ENST00000579028 ZNF541Q9H0D2 1346 aa11.82□□□□□ -0.52
BRIP1-204ENST00000579028 NPHP1O15259 732 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 EPHX2P34913 555 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
BRIP1-204ENST00000579028 FKBP4Q02790 459 aaKnown RBP eCLIP11.81□□□□□ -0.52
BRIP1-204ENST00000579028 DEFB115Q30KQ5 88 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
BRIP1-204ENST00000579028 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
BRIP1-204ENST00000579028 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
BRIP1-204ENST00000579028 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
BRIP1-204ENST00000579028 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
BRIP1-204ENST00000579028 CNTROBQ8N137 903 aa11.8□□□□□ -0.52
BRIP1-204ENST00000579028 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
BRIP1-204ENST00000579028 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 A1BGP04217 495 aa11.79□□□□□ -0.52
BRIP1-204ENST00000579028 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 NPR1P16066 1061 aa11.79□□□□□ -0.52
BRIP1-204ENST00000579028 TEFQ10587 303 aa11.79□□□□□ -0.52
BRIP1-204ENST00000579028 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
BRIP1-204ENST00000579028 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
BRIP1-204ENST00000579028 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
BRIP1-204ENST00000579028 FZD9O00144 591 aa11.78□□□□□ -0.52
BRIP1-204ENST00000579028 RGS19P49795 217 aa11.78□□□□□ -0.52
BRIP1-204ENST00000579028 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
BRIP1-204ENST00000579028 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
BRIP1-204ENST00000579028 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
BRIP1-204ENST00000579028 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
BRIP1-204ENST00000579028 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
BRIP1-204ENST00000579028 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
BRIP1-204ENST00000579028 NBPF5PQ86XG9 351 aaPredicted RBP11.77□□□□□ -0.53
BRIP1-204ENST00000579028 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.53
BRIP1-204ENST00000579028 GPC2Q8N158 579 aa11.77□□□□□ -0.53
BRIP1-204ENST00000579028 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
BRIP1-204ENST00000579028 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
BRIP1-204ENST00000579028 RGL2O15211 777 aa11.76□□□□□ -0.53
BRIP1-204ENST00000579028 IARSP41252 1262 aaKnown RBP11.76□□□□□ -0.53
BRIP1-204ENST00000579028 MLLT1Q03111 559 aaPredicted RBP11.76□□□□□ -0.53
BRIP1-204ENST00000579028 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
BRIP1-204ENST00000579028 GAS2L2Q8NHY3 880 aa11.76□□□□□ -0.53
BRIP1-204ENST00000579028 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
BRIP1-204ENST00000579028 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
BRIP1-204ENST00000579028 ABT1Q9ULW3 272 aaKnown RBP11.76□□□□□ -0.53
BRIP1-204ENST00000579028 LTBP1Q14766 1721 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 ECE1P42892 770 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
BRIP1-204ENST00000579028 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
BRIP1-204ENST00000579028 KCNQ3O43525 872 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 PSMD1Q99460 953 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
BRIP1-204ENST00000579028 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
BRIP1-204ENST00000579028 BTBD11A6QL63 1104 aa11.73□□□□□ -0.53
BRIP1-204ENST00000579028 COL4A5P29400 1685 aa11.73□□□□□ -0.53
BRIP1-204ENST00000579028 PIP4K2AP48426 406 aaPredicted RBP11.73□□□□□ -0.53
BRIP1-204ENST00000579028 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
BRIP1-204ENST00000579028 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms