RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
PTPRM-210ENST00000578916 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
PTPRM-210ENST00000578916 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPRM-210ENST00000578916 TEFQ10587 303 aa12.35□□□□□ -0.43
PTPRM-210ENST00000578916 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
PTPRM-210ENST00000578916 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
PTPRM-210ENST00000578916 HACL1Q9UJ83 578 aa12.35□□□□□ -0.43
PTPRM-210ENST00000578916 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 HSPA5P11021 654 aaKnown RBP12.34□□□□□ -0.43
PTPRM-210ENST00000578916 HSPA8P11142 646 aaKnown RBP12.34□□□□□ -0.43
PTPRM-210ENST00000578916 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
PTPRM-210ENST00000578916 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPRM-210ENST00000578916 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
PTPRM-210ENST00000578916 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
PTPRM-210ENST00000578916 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 RASSF10A6NK89 507 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 DIAPH1O60610 1272 aaKnown RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 A1BGP04217 495 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 EPHX2P34913 555 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 CNTROBQ8N137 903 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 FMNL2Q96PY5 1086 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
PTPRM-210ENST00000578916 ZNF541Q9H0D2 1346 aa12.33□□□□□ -0.44
PTPRM-210ENST00000578916 COL11A2P13942 1736 aaPredicted RBP12.32□□□□□ -0.44
PTPRM-210ENST00000578916 NPR1P16066 1061 aa12.32□□□□□ -0.44
PTPRM-210ENST00000578916 MAP1SQ66K74 1059 aaPredicted RBP12.32□□□□□ -0.44
PTPRM-210ENST00000578916 RTKN2Q8IZC4 609 aa12.32□□□□□ -0.44
PTPRM-210ENST00000578916 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
PTPRM-210ENST00000578916 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
PTPRM-210ENST00000578916 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
PTPRM-210ENST00000578916 SCN7AQ01118 1682 aa12.31□□□□□ -0.44
PTPRM-210ENST00000578916 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
PTPRM-210ENST00000578916 SLX4Q8IY92 1834 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
PTPRM-210ENST00000578916 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 BEGAINQ9BUH8 593 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 SCN4AP35499 1836 aa12.3□□□□□ -0.44
PTPRM-210ENST00000578916 FZD9O00144 591 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 IARSP41252 1262 aaKnown RBP12.29□□□□□ -0.44
PTPRM-210ENST00000578916 MLLT1Q03111 559 aaPredicted RBP12.29□□□□□ -0.44
PTPRM-210ENST00000578916 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 GPC2Q8N158 579 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
PTPRM-210ENST00000578916 KLRG2A4D1S0 409 aaPredicted RBP12.28□□□□□ -0.44
PTPRM-210ENST00000578916 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
PTPRM-210ENST00000578916 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
PTPRM-210ENST00000578916 ECE1P42892 770 aa12.28□□□□□ -0.44
PTPRM-210ENST00000578916 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
PTPRM-210ENST00000578916 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
PTPRM-210ENST00000578916 DDX21Q9NR30 783 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTPRM-210ENST00000578916 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
PTPRM-210ENST00000578916 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
PTPRM-210ENST00000578916 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
PTPRM-210ENST00000578916 KCNQ3O43525 872 aa12.27□□□□□ -0.45
PTPRM-210ENST00000578916 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
PTPRM-210ENST00000578916 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
PTPRM-210ENST00000578916 GRM1Q13255 1194 aa12.27□□□□□ -0.45
PTPRM-210ENST00000578916 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
PTPRM-210ENST00000578916 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.45
PTPRM-210ENST00000578916 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
PTPRM-210ENST00000578916 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
PTPRM-210ENST00000578916 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
PTPRM-210ENST00000578916 USP16Q9Y5T5 823 aa12.26□□□□□ -0.45
PTPRM-210ENST00000578916 ARFGEF2Q9Y6D5 1785 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 RGS19P49795 217 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
PTPRM-210ENST00000578916 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 PSMD1Q99460 953 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 ADAMTSL1Q8N6G6 1762 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 CACNA1SQ13698 1873 aa12.25□□□□□ -0.45
PTPRM-210ENST00000578916 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
PTPRM-210ENST00000578916 SNRPA1P09661 255 aaKnown RBP12.24□□□□□ -0.45
PTPRM-210ENST00000578916 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTPRM-210ENST00000578916 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
PTPRM-210ENST00000578916 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
PTPRM-210ENST00000578916 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
PTPRM-210ENST00000578916 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
PTPRM-210ENST00000578916 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
PTPRM-210ENST00000578916 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
PTPRM-210ENST00000578916 RGL2O15211 777 aa12.23□□□□□ -0.45
PTPRM-210ENST00000578916 EPS15P42566 896 aa12.23□□□□□ -0.45
PTPRM-210ENST00000578916 TSKSQ9UJT2 592 aa12.23□□□□□ -0.45
PTPRM-210ENST00000578916 TRAF5O00463 557 aa12.22□□□□□ -0.45
PTPRM-210ENST00000578916 MAP2K2P36507 400 aa12.22□□□□□ -0.45
PTPRM-210ENST00000578916 SCNN1DP51172 638 aa12.22□□□□□ -0.45
PTPRM-210ENST00000578916 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
PTPRM-210ENST00000578916 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms