RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 QTRT2Q9H974 415 aaKnown RBP28.6■■■□□ 2.17
LIMD2-205ENST00000578402 LRRFIP2Q9Y608 721 aaKnown RBP28.59■■■□□ 2.17
LIMD2-205ENST00000578402 PALLDQ8WX93 1383 aa28.59■■■□□ 2.17
LIMD2-205ENST00000578402 IGKV5-2P06315 115 aa28.59■■■□□ 2.17
LIMD2-205ENST00000578402 RGS3P49796 1198 aa28.59■■■□□ 2.17
LIMD2-205ENST00000578402 ATP8B2P98198 1209 aa28.59■■■□□ 2.17
LIMD2-205ENST00000578402 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
LIMD2-205ENST00000578402 NEURL1BA8MQ27 555 aa28.57■■■□□ 2.16
LIMD2-205ENST00000578402 NBPF7P0C2Y1 421 aaPredicted RBP28.57■■■□□ 2.16
LIMD2-205ENST00000578402 CWF19L2Q2TBE0 894 aaKnown RBP28.57■■■□□ 2.16
LIMD2-205ENST00000578402 LOC102724428A0A0B4J2F2 783 aa28.56■■■□□ 2.16
LIMD2-205ENST00000578402 GRM8O00222 908 aa28.56■■■□□ 2.16
LIMD2-205ENST00000578402 SIK1P57059 783 aa28.56■■■□□ 2.16
LIMD2-205ENST00000578402 SEPT12Q8IYM1 358 aa28.56■■■□□ 2.16
LIMD2-205ENST00000578402 MYD88Q99836 296 aa28.56■■■□□ 2.16
LIMD2-205ENST00000578402 KCNQ2O43526 872 aa28.55■■■□□ 2.16
LIMD2-205ENST00000578402 CHD1LQ86WJ1 897 aa28.55■■■□□ 2.16
LIMD2-205ENST00000578402 RREB1Q92766 1687 aa28.55■■■□□ 2.16
LIMD2-205ENST00000578402 TTLL7Q6ZT98 887 aa28.54■■■□□ 2.16
LIMD2-205ENST00000578402 GCKRQ14397 625 aa28.53■■■□□ 2.16
LIMD2-205ENST00000578402 AFDNP55196 1824 aaKnown RBP28.53■■■□□ 2.16
LIMD2-205ENST00000578402 ZNF772Q68DY9 489 aaPredicted RBP28.53■■■□□ 2.16
LIMD2-205ENST00000578402 ATP6V1AP38606 617 aa28.52■■■□□ 2.16
LIMD2-205ENST00000578402 IL6STP40189 918 aaPredicted RBP28.52■■■□□ 2.16
LIMD2-205ENST00000578402 MTX1Q13505 466 aa28.52■■■□□ 2.16
LIMD2-205ENST00000578402 ANKRD45Q5TZF3 282 aa28.51■■■□□ 2.15
LIMD2-205ENST00000578402 KIF6Q6ZMV9 814 aa28.51■■■□□ 2.15
LIMD2-205ENST00000578402 SSH3Q8TE77 659 aa28.51■■■□□ 2.15
LIMD2-205ENST00000578402 COL15A1P39059 1388 aa28.51■■■□□ 2.15
LIMD2-205ENST00000578402 BTAF1O14981 1849 aa28.5■■■□□ 2.15
LIMD2-205ENST00000578402 COL5A3P25940 1745 aaPredicted RBP28.49■■■□□ 2.15
LIMD2-205ENST00000578402 POLA2Q14181 598 aa28.49■■■□□ 2.15
LIMD2-205ENST00000578402 ZBTB1Q9Y2K1 713 aa28.49■■■□□ 2.15
LIMD2-205ENST00000578402 SBF2Q86WG5 1849 aa28.49■■■□□ 2.15
LIMD2-205ENST00000578402 PNMA6EA0A0J9YXQ4 647 aa28.48■■■□□ 2.15
LIMD2-205ENST00000578402 PDE4AP27815 886 aa28.48■■■□□ 2.15
LIMD2-205ENST00000578402 LNPKQ9C0E8 428 aa28.48■■■□□ 2.15
LIMD2-205ENST00000578402 CCDC87Q9NVE4 849 aa28.48■■■□□ 2.15
LIMD2-205ENST00000578402 PPP1R42Q7Z4L9 355 aa28.47■■■□□ 2.15
LIMD2-205ENST00000578402 MAP3K15Q6ZN16 1313 aa28.46■■■□□ 2.15
LIMD2-205ENST00000578402 ITPK1Q13572 414 aa28.46■■■□□ 2.15
LIMD2-205ENST00000578402 ZBTB3Q9H5J0 574 aa28.46■■■□□ 2.15
LIMD2-205ENST00000578402 ZBTB47Q9UFB7 747 aaPredicted RBP28.46■■■□□ 2.15
LIMD2-205ENST00000578402 TRIM28Q13263 835 aaKnown RBP28.45■■■□□ 2.15
LIMD2-205ENST00000578402 CCDC191Q8NCU4 936 aa28.45■■■□□ 2.15
LIMD2-205ENST00000578402 BACH2Q9BYV9 841 aa28.45■■■□□ 2.15
LIMD2-205ENST00000578402 CRKLP46109 303 aaKnown RBP28.44■■■□□ 2.14
LIMD2-205ENST00000578402 FAM161AQ3B820 660 aa28.44■■■□□ 2.14
LIMD2-205ENST00000578402 INTS5Q6P9B9 1019 aaKnown RBP28.44■■■□□ 2.14
LIMD2-205ENST00000578402 SUCLG2Q96I99 432 aa28.44■■■□□ 2.14
LIMD2-205ENST00000578402 CWC25Q9NXE8 425 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-205ENST00000578402 ATP5J2-PTCD1G3V325 749 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 SRGAP3O43295 1099 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 EIF5P55010 431 aaKnown RBP28.43■■■□□ 2.14
LIMD2-205ENST00000578402 RBM6P78332 1123 aaKnown RBP28.43■■■□□ 2.14
LIMD2-205ENST00000578402 TCIRG1Q13488 830 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 NPM2Q86SE8 214 aaKnown RBP28.43■■■□□ 2.14
LIMD2-205ENST00000578402 ISCA1Q9BUE6 129 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 ZNF330Q9Y3S2 320 aaPredicted RBP28.43■■■□□ 2.14
LIMD2-205ENST00000578402 ERVV-1B6SEH8 477 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 HSP90AB3PQ58FF7 597 aa28.43■■■□□ 2.14
LIMD2-205ENST00000578402 GIGYF2Q6Y7W6 1299 aaKnown RBP28.42■■■□□ 2.14
LIMD2-205ENST00000578402 KAZALD1Q96I82 304 aa28.42■■■□□ 2.14
LIMD2-205ENST00000578402 A0A087WZG4 1122 aa28.41■■■□□ 2.14
LIMD2-205ENST00000578402 LY75O60449 1722 aa28.41■■■□□ 2.14
LIMD2-205ENST00000578402 H7C1W4 665 aa28.4■■■□□ 2.14
LIMD2-205ENST00000578402 RAB11FIP3O75154 756 aa28.4■■■□□ 2.14
LIMD2-205ENST00000578402 CASP7P55210 303 aa28.4■■■□□ 2.14
LIMD2-205ENST00000578402 BRWD3Q6RI45 1802 aa28.4■■■□□ 2.14
LIMD2-205ENST00000578402 ANKRD36CQ5JPF3 1778 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 HSP90AB4PQ58FF6 505 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 FAM182BQ5T319 152 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 KRT27Q7Z3Y8 459 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 BCL11BQ9C0K0 894 aaPredicted RBP28.39■■■□□ 2.14
LIMD2-205ENST00000578402 RBM19Q9Y4C8 960 aaKnown RBP28.39■■■□□ 2.14
LIMD2-205ENST00000578402 CNTNAP4Q9C0A0 1308 aa28.39■■■□□ 2.14
LIMD2-205ENST00000578402 PTF1AQ7RTS3 328 aa28.38■■■□□ 2.13
LIMD2-205ENST00000578402 BICC1Q9H694 974 aaKnown RBP28.38■■■□□ 2.13
LIMD2-205ENST00000578402 EXOC6BQ9Y2D4 811 aa28.38■■■□□ 2.13
LIMD2-205ENST00000578402 MYH14Q7Z406 1995 aaKnown RBP28.38■■■□□ 2.13
LIMD2-205ENST00000578402 UBE3BQ7Z3V4 1068 aa28.38■■■□□ 2.13
LIMD2-205ENST00000578402 DZIP3Q86Y13 1208 aaKnown RBP28.38■■■□□ 2.13
LIMD2-205ENST00000578402 LRRCC1Q9C099 1032 aa28.38■■■□□ 2.13
LIMD2-205ENST00000578402 NOP58Q9Y2X3 529 aaKnown RBP28.38■■■□□ 2.13
LIMD2-205ENST00000578402 C8orf34Q49A92 452 aa28.37■■■□□ 2.13
LIMD2-205ENST00000578402 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.132e-6■■□□□ 12.9
LIMD2-205ENST00000578402 RABL6Q3YEC7 729 aaPredicted RBP28.36■■■□□ 2.13
LIMD2-205ENST00000578402 RC3H1Q5TC82 1133 aaKnown RBP28.35■■■□□ 2.13
LIMD2-205ENST00000578402 LINC00116Q8NCU8 138 aa28.35■■■□□ 2.13
LIMD2-205ENST00000578402 SURF6O75683 361 aaKnown RBP28.34■■■□□ 2.13
LIMD2-205ENST00000578402 NUP98P52948 1817 aa28.34■■■□□ 2.13
LIMD2-205ENST00000578402 ARXQ96QS3 562 aa28.33■■■□□ 2.13
LIMD2-205ENST00000578402 HLFQ16534 295 aa28.33■■■□□ 2.13
LIMD2-205ENST00000578402 RGL2O15211 777 aa28.32■■■□□ 2.12
LIMD2-205ENST00000578402 BMP2KLQ5H9B9 411 aa28.32■■■□□ 2.12
LIMD2-205ENST00000578402 PLEKHM2Q8IWE5 1019 aa28.32■■■□□ 2.12
LIMD2-205ENST00000578402 PCCAP05165 728 aaPredicted RBP28.31■■■□□ 2.12
LIMD2-205ENST00000578402 RXRBP28702 533 aa28.31■■■□□ 2.12
LIMD2-205ENST00000578402 EPHA10Q5JZY3 1008 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms