RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 SLX4Q8IY92 1834 aa18.33■□□□□ 0.52
UPF3AP2-202ENST00000578315 ST5P78524 1137 aa18.32■□□□□ 0.52
UPF3AP2-202ENST00000578315 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
UPF3AP2-202ENST00000578315 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
UPF3AP2-202ENST00000578315 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
UPF3AP2-202ENST00000578315 SRGNP10124 158 aa18.31■□□□□ 0.52
UPF3AP2-202ENST00000578315 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
UPF3AP2-202ENST00000578315 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
UPF3AP2-202ENST00000578315 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
UPF3AP2-202ENST00000578315 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
UPF3AP2-202ENST00000578315 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
UPF3AP2-202ENST00000578315 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
UPF3AP2-202ENST00000578315 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
UPF3AP2-202ENST00000578315 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
UPF3AP2-202ENST00000578315 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
UPF3AP2-202ENST00000578315 NBPF5PQ86XG9 351 aaPredicted RBP18.28■□□□□ 0.52
UPF3AP2-202ENST00000578315 BCORQ6W2J9 1755 aa18.27■□□□□ 0.52
UPF3AP2-202ENST00000578315 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
UPF3AP2-202ENST00000578315 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.51
UPF3AP2-202ENST00000578315 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
UPF3AP2-202ENST00000578315 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
UPF3AP2-202ENST00000578315 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
UPF3AP2-202ENST00000578315 ARFGEF2Q9Y6D5 1785 aa18.25■□□□□ 0.51
UPF3AP2-202ENST00000578315 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
UPF3AP2-202ENST00000578315 ZNF277Q9NRM2 450 aaPredicted RBP18.25■□□□□ 0.51
UPF3AP2-202ENST00000578315 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
UPF3AP2-202ENST00000578315 CCDC93Q567U6 631 aa18.24■□□□□ 0.51
UPF3AP2-202ENST00000578315 LDHDQ86WU2 507 aa18.24■□□□□ 0.51
UPF3AP2-202ENST00000578315 C7orf43Q8WVR3 580 aa18.24■□□□□ 0.51
UPF3AP2-202ENST00000578315 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
UPF3AP2-202ENST00000578315 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 FOXN1O15353 648 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 NPR1P16066 1061 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 MCM10Q7L590 875 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 CLEC11AQ9Y240 323 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
UPF3AP2-202ENST00000578315 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
UPF3AP2-202ENST00000578315 CLEC4GQ6UXB4 293 aa18.22■□□□□ 0.51
UPF3AP2-202ENST00000578315 L3MBTL3Q96JM7 780 aaPredicted RBP18.22■□□□□ 0.51
UPF3AP2-202ENST00000578315 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
UPF3AP2-202ENST00000578315 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
UPF3AP2-202ENST00000578315 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 DCTN1Q14203 1278 aa18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 TPTE2Q6XPS3 522 aa18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
UPF3AP2-202ENST00000578315 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 ITGBL1O95965 494 aaPredicted RBP18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 VEGFBP49765 207 aa18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 SCN4AP35499 1836 aa18.2■□□□□ 0.5
UPF3AP2-202ENST00000578315 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
UPF3AP2-202ENST00000578315 HLFQ16534 295 aa18.19■□□□□ 0.5
UPF3AP2-202ENST00000578315 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
UPF3AP2-202ENST00000578315 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
UPF3AP2-202ENST00000578315 KLRG2A4D1S0 409 aaPredicted RBP18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 EPHX2P34913 555 aa18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
UPF3AP2-202ENST00000578315 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 NUDCQ9Y266 331 aa18.17■□□□□ 0.5
UPF3AP2-202ENST00000578315 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
UPF3AP2-202ENST00000578315 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
UPF3AP2-202ENST00000578315 NUTM1Q86Y26 1132 aa18.15■□□□□ 0.5
UPF3AP2-202ENST00000578315 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
UPF3AP2-202ENST00000578315 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
UPF3AP2-202ENST00000578315 FZD9O00144 591 aa18.14■□□□□ 0.49
UPF3AP2-202ENST00000578315 LBX1P52954 281 aa18.14■□□□□ 0.49
UPF3AP2-202ENST00000578315 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
UPF3AP2-202ENST00000578315 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.49
UPF3AP2-202ENST00000578315 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
UPF3AP2-202ENST00000578315 JDP2Q8WYK2 163 aa18.13■□□□□ 0.49
UPF3AP2-202ENST00000578315 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
UPF3AP2-202ENST00000578315 DEFB115Q30KQ5 88 aa18.12■□□□□ 0.49
UPF3AP2-202ENST00000578315 GPC2Q8N158 579 aa18.12■□□□□ 0.49
UPF3AP2-202ENST00000578315 WBP1LQ9NX94 342 aa18.12■□□□□ 0.49
UPF3AP2-202ENST00000578315 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
UPF3AP2-202ENST00000578315 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
UPF3AP2-202ENST00000578315 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
UPF3AP2-202ENST00000578315 SLC51AQ86UW1 340 aa18.11■□□□□ 0.49
UPF3AP2-202ENST00000578315 ABT1Q9ULW3 272 aaKnown RBP18.11■□□□□ 0.49
UPF3AP2-202ENST00000578315 COL4A5P29400 1685 aa18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 RASSF10A6NK89 507 aa18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 RGL2O15211 777 aa18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 FMR1Q06787 632 aaKnown RBP eCLIP18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 PSMD1Q99460 953 aa18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
UPF3AP2-202ENST00000578315 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
UPF3AP2-202ENST00000578315 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms