RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 GRM8O00222 908 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SDSP20132 328 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
NF1-218ENST00000577967 IMMTQ16891 758 aaKnown RBP5.53□□□□□ -1.52
NF1-218ENST00000577967 CAVIN4Q5BKX8 364 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 LAMC1P11047 1609 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 USP6P35125 1406 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 CDC42BPGQ6DT37 1551 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SETBP1Q9Y6X0 1596 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 RFC4P35249 363 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 DDX11Q96FC9 970 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 SLAIN2Q9P270 581 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 PREX1Q8TCU6 1659 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 ARHGAP31Q2M1Z3 1444 aa5.53□□□□□ -1.52
NF1-218ENST00000577967 ZBTB7BO15156 539 aaPredicted RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 KCNQ3O43525 872 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 C8orf34Q49A92 452 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 SLC52A2Q9HAB3 445 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 ZBTB40Q9NUA8 1239 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 LARP1BQ659C4 914 aaKnown RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 CCDC73Q6ZRK6 1079 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 TCEAL9Q9UHQ7 104 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 DZIP3Q86Y13 1208 aaKnown RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 TMEM94Q12767 1356 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 POLR1AO95602 1720 aaPredicted RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 MINDY4BA8MYZ0 360 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 XBP1P17861 261 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 TFCP2Q12800 502 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 GLIPR1L2Q4G1C9 344 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 BMP2KLQ5H9B9 411 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 RNF214Q8ND24 703 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 TBC1D2Q9BYX2 928 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 ECHDC1Q9NTX5 307 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 SBNO2Q9Y2G9 1366 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 LDHAL6AQ6ZMR3 332 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 ANO8Q9HCE9 1232 aaPredicted RBP5.52□□□□□ -1.53
NF1-218ENST00000577967 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
NF1-218ENST00000577967 NEXMIFQ5QGS0 1516 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 ZNF790Q6PG37 636 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 LMBR1LQ6UX01 489 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 ZNF396Q96N95 335 aaPredicted RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 TSPY26PQ9H489 355 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 TULP4Q9NRJ4 1543 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 CHL1O00533 1208 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 ALDH1L1O75891 902 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 USP5P45974 858 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 PDE1AP54750 535 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 ZSCAN31Q96LW9 406 aaPredicted RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 DIP2BQ9P265 1576 aa5.51□□□□□ -1.53
NF1-218ENST00000577967 MPHOSPH10O00566 681 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 DDX46Q7L014 1031 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 PCMTD1Q96MG8 357 aaPredicted RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 UTP14AQ9BVJ6 771 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 HOOK1Q9UJC3 728 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 RIMS1Q86UR5 1692 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 WDR33Q9C0J8 1336 aaKnown RBP5.51□□□□□ -1.53
NF1-218ENST00000577967 NIP7Q9Y221 180 aaKnown RBP eCLIP5.51□□□□□ -1.53
NF1-218ENST00000577967 KRT32Q14532 448 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 NBPF5PQ86XG9 351 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 RAB11FIP4Q86YS3 637 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 SEC24BO95487 1268 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 TPM2P07951 284 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 FAM98CQ17RN3 349 aaKnown RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 CCDC152Q4G0S7 254 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 ZSCAN29Q8IWY8 852 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 UBAC1Q9BSL1 405 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 INSRP06213 1382 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 AATKQ6ZMQ8 1374 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 IQGAP1P46940 1657 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 SSFA2P28290 1259 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 EIF4A1P60842 406 aaKnown RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 HAND2P61296 217 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 ST5P78524 1137 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 NMIQ13287 307 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 STK38Q15208 465 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 DZIP1Q86YF9 867 aaKnown RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 TBC1D32Q96NH3 1257 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 KDM2BQ8NHM5 1336 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 PPFIA3O75145 1194 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 CCT2P78371 535 aaKnown RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 MAP3K12Q12852 859 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 PLEKHM2Q8IWE5 1019 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 IL17REQ8NFR9 667 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 IQSEC3Q9UPP2 1182 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 U3KPZ7 1027 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 POLR3DP05423 398 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 NASPP49321 788 aaPredicted RBP5.5□□□□□ -1.53
NF1-218ENST00000577967 GUCY1B3Q02153 619 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 SETDB2Q96T68 719 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 DCTPP1Q9H773 170 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 ARHGEF40Q8TER5 1519 aa5.5□□□□□ -1.53
NF1-218ENST00000577967 ZNF213O14771 459 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 LETM1O95202 739 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 OLFM4Q6UX06 510 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 KLHDC4Q8TBB5 520 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 IRS4O14654 1257 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 A1BGP04217 495 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms