RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 C7orf43Q8WVR3 580 aa5.92□□□□□ -1.46
CDH8-204ENST00000577536 ZNF594Q96JF6 807 aaPredicted RBP5.92□□□□□ -1.46
CDH8-204ENST00000577536 MAFBQ9Y5Q3 323 aaPredicted RBP5.92□□□□□ -1.46
CDH8-204ENST00000577536 GPC6Q9Y625 555 aaPredicted RBP5.92□□□□□ -1.46
CDH8-204ENST00000577536 SFI1A8K8P3 1242 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 NEURL1BA8MQ27 555 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 EFSO43281 561 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 DKK1O94907 266 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 PSMA6P60900 246 aaKnown RBP5.91□□□□□ -1.46
CDH8-204ENST00000577536 SH3PXD2AQ5TCZ1 1133 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 TSPAN10Q9H1Z9 355 aaPredicted RBP5.91□□□□□ -1.46
CDH8-204ENST00000577536 RRAGCQ9HB90 399 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 MKL2Q9ULH7 1088 aa5.91□□□□□ -1.46
CDH8-204ENST00000577536 RBM19Q9Y4C8 960 aaKnown RBP5.91□□□□□ -1.46
CDH8-204ENST00000577536 RASA1P20936 1047 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 AMPD1P23109 780 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 ADH6P28332 368 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 HIRAP54198 1017 aaPredicted RBP5.9□□□□□ -1.46
CDH8-204ENST00000577536 LAMC2Q13753 1193 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 POTEAQ6S8J7 498 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 LRRC69Q6ZNQ3 347 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 TSEN2Q8NCE0 465 aaKnown RBP5.9□□□□□ -1.46
CDH8-204ENST00000577536 CALR3Q96L12 384 aaKnown RBP5.9□□□□□ -1.46
CDH8-204ENST00000577536 AVENQ9NQS1 362 aaPredicted RBP5.9□□□□□ -1.46
CDH8-204ENST00000577536 STRN4Q9NRL3 753 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 MARK1Q9P0L2 795 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 CHMP3Q9Y3E7 222 aa5.9□□□□□ -1.46
CDH8-204ENST00000577536 FURINP09958 794 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 HOXB4P17483 251 aaPredicted RBP5.89□□□□□ -1.47
CDH8-204ENST00000577536 ZNF468Q5VIY5 522 aaPredicted RBP5.89□□□□□ -1.47
CDH8-204ENST00000577536 C1orf53Q5VUE5 145 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 RHPN1Q8TCX5 695 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 BTBD6Q96KE9 485 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 PPP1R12CQ9BZL4 782 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 NEUROD4Q9HD90 331 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 KLF15Q9UIH9 416 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 PRR12Q9ULL5 1215 aa5.89□□□□□ -1.47
CDH8-204ENST00000577536 SEC13P55735 322 aa5.88□□□□□ -1.47
CDH8-204ENST00000577536 LINC00114Q6XXX2 140 aa5.88□□□□□ -1.47
CDH8-204ENST00000577536 FCHSD1Q86WN1 690 aa5.88□□□□□ -1.47
CDH8-204ENST00000577536 PHACTR1Q9C0D0 580 aa5.88□□□□□ -1.47
CDH8-204ENST00000577536 HCN4Q9Y3Q4 1203 aa5.88□□□□□ -1.47
CDH8-204ENST00000577536 C21orf2O43822 256 aa5.87□□□□□ -1.47
CDH8-204ENST00000577536 PPP1R12BO60237 982 aaPredicted RBP5.87□□□□□ -1.47
CDH8-204ENST00000577536 BAG6P46379 1132 aa5.87□□□□□ -1.47
CDH8-204ENST00000577536 PCBP4P57723 403 aaKnown RBP5.87□□□□□ -1.47
CDH8-204ENST00000577536 KANK4Q5T7N3 995 aaPredicted RBP5.87□□□□□ -1.47
CDH8-204ENST00000577536 LARP1Q6PKG0 1096 aaKnown RBP5.87□□□□□ -1.47
CDH8-204ENST00000577536 STAG2Q8N3U4 1231 aa5.87□□□□□ -1.47
CDH8-204ENST00000577536 ATAD2Q6PL18 1390 aa5.87□□□□□ -1.47
CDH8-204ENST00000577536 PIK3R2O00459 728 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 GNB5O14775 395 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 COL8A1P27658 744 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 DGKGP49619 791 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 PTK7Q13308 1070 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 CRTC2Q53ET0 693 aaPredicted RBP5.86□□□□□ -1.47
CDH8-204ENST00000577536 CHSY3Q70JA7 882 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 ALYREFQ86V81 257 aaKnown RBP5.86□□□□□ -1.47
CDH8-204ENST00000577536 GAS2L2Q8NHY3 880 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 SCG3Q8WXD2 468 aaKnown RBP5.86□□□□□ -1.47
CDH8-204ENST00000577536 HSH2DQ96JZ2 352 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 C2orf49Q9BVC5 232 aaPredicted RBP5.86□□□□□ -1.47
CDH8-204ENST00000577536 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
CDH8-204ENST00000577536 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 LMOD1P29536 600 aaPredicted RBP5.85□□□□□ -1.47
CDH8-204ENST00000577536 SFSWAPQ12872 951 aaKnown RBP5.85□□□□□ -1.47
CDH8-204ENST00000577536 DPYDQ12882 1025 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 GRIN2CQ14957 1233 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 SYT9Q86SS6 491 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 ZNF280CQ8ND82 737 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 VRTNQ9H8Y1 702 aa5.85□□□□□ -1.47
CDH8-204ENST00000577536 KRBA1A5PL33 1030 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L15C9J2P7 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L10C9JJH3 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L13C9JLJ4 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L12C9JPN9 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L11C9JVI0 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L21D6R901 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L18D6R9N7 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L22D6RA61 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L17D6RBQ6 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L19D6RCP7 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L20D6RJB6 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 USP17L24Q0WX57 530 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 ALDH16A1Q8IZ83 802 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 CHMP7Q8WUX9 453 aaPredicted RBP5.84□□□□□ -1.47
CDH8-204ENST00000577536 SUSD3Q96L08 255 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 CEP63Q96MT8 703 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 MDFIQ99750 246 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 HINFPQ9BQA5 517 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 SUV39H2Q9H5I1 410 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
CDH8-204ENST00000577536 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
CDH8-204ENST00000577536 ELOA3DA6NLF2 546 aaPredicted RBP5.83□□□□□ -1.48
CDH8-204ENST00000577536 SIN3BO75182 1162 aa5.83□□□□□ -1.48
CDH8-204ENST00000577536 SPEM2Q0P670 501 aa5.83□□□□□ -1.48
CDH8-204ENST00000577536 ELOA3BQ3SY89 546 aa5.83□□□□□ -1.48
CDH8-204ENST00000577536 ANKMY2Q8IV38 441 aa5.83□□□□□ -1.48
CDH8-204ENST00000577536 ELOA3Q8NG57 546 aa5.83□□□□□ -1.48
CDH8-204ENST00000577536 SLC30A3Q99726 388 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms