RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 PLEKHH2Q8IVE3 1493 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 BAG3O95817 575 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 SSRP1Q08945 709 aaKnown RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 PRPF4BQ13523 1007 aaKnown RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 TTF1Q15361 905 aaPredicted RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 GABPB2Q8TAK5 448 aaPredicted RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 KIF3CO14782 793 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 PDE4BQ07343 736 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 TTLL12Q14166 644 aaPredicted RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 STX1AQ16623 288 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
USP6-205ENST00000574788 STIM2Q9P246 746 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 TXNDC16Q9P2K2 825 aa11.5□□□□□ -0.57
USP6-205ENST00000574788 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
USP6-205ENST00000574788 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 IMPG2Q9BZV3 1241 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 MXRA7P84157 204 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
USP6-205ENST00000574788 MAATS1Q7Z4T9 603 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 DAPK1P53355 1430 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 NUTM2GQ5VZR2 741 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 DDX19AQ9NUU7 478 aaKnown RBP11.49□□□□□ -0.57
USP6-205ENST00000574788 IBSPP21815 317 aaPredicted RBP11.49□□□□□ -0.57
USP6-205ENST00000574788 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
USP6-205ENST00000574788 USH1CQ9Y6N9 552 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 TUBB4AP04350 444 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 SLC5A1P13866 664 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 KIF5AQ12840 1032 aa11.49□□□□□ -0.57
USP6-205ENST00000574788 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 VIMP08670 466 aaKnown RBP11.48□□□□□ -0.57
USP6-205ENST00000574788 MNAT1P51948 309 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 APBB1IPQ7Z5R6 666 aaPredicted RBP11.48□□□□□ -0.57
USP6-205ENST00000574788 CEP83Q9Y592 693 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 GOLGA4Q13439 2230 aaKnown RBP11.48□□□□□ -0.57
USP6-205ENST00000574788 MYO1BO43795 1136 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 UBA7P41226 1012 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 PSMC4P43686 418 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 TCERG1LQ5VWI1 586 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 PPP1R9BQ96SB3 815 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 HLA-DOAP06340 250 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 DDX54Q8TDD1 881 aaKnown RBP11.48□□□□□ -0.57
USP6-205ENST00000574788 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
USP6-205ENST00000574788 ZBTB16Q05516 673 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 LMBR1Q8WVP7 490 aa11.48□□□□□ -0.57
USP6-205ENST00000574788 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
USP6-205ENST00000574788 TUBBP07437 444 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 CCDC117Q8IWD4 279 aaPredicted RBP11.47□□□□□ -0.57
USP6-205ENST00000574788 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
USP6-205ENST00000574788 IFIT5Q13325 482 aaKnown RBP11.47□□□□□ -0.57
USP6-205ENST00000574788 CFAP58Q5T655 872 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 KCNH5Q8NCM2 988 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 POGZQ7Z3K3 1410 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 PRC1O43663 620 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 PUF60Q9UHX1 559 aaKnown RBP11.47□□□□□ -0.57
USP6-205ENST00000574788 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 ZNF213O14771 459 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 ERCC6LQ2NKX8 1250 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 SYCE3A1L190 88 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 LDHCP07864 332 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
USP6-205ENST00000574788 ZFYP08048 801 aaPredicted RBP11.46□□□□□ -0.57
USP6-205ENST00000574788 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 MCM4P33991 863 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 MSL1Q68DK7 614 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 CCDC160A6NGH7 325 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 NLRP5P59047 1200 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 BICD1Q96G01 975 aa11.46□□□□□ -0.57
USP6-205ENST00000574788 OPA1O60313 960 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 SLC52A1Q9NWF4 448 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 CYLC1P35663 651 aaPredicted RBP11.46□□□□□ -0.58
USP6-205ENST00000574788 TPD52P55327 224 aaPredicted RBP11.46□□□□□ -0.58
USP6-205ENST00000574788 FAM69CQ0P6D2 419 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 EXOC1Q9NV70 894 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.58
USP6-205ENST00000574788 SH3BP5O60239 455 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
USP6-205ENST00000574788 RPGRIP1LQ68CZ1 1315 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 GNAT3A8MTJ3 354 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 OTUD6BQ8N6M0 293 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 CFAP65Q6ZU64 1925 aaKnown RBP11.45□□□□□ -0.58
USP6-205ENST00000574788 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
USP6-205ENST00000574788 AMOTQ4VCS5 1084 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms