RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CREBRFQ8IUR6 639 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 STK11IPQ8N1F8 1099 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
RPA1-207ENST00000574049 BICDL1Q6ZP65 573 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 DNAJC10Q8IXB1 793 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 KDRP35968 1356 aa9.15□□□□□ -0.94
RPA1-207ENST00000574049 VPS37CA5D8V6 355 aaPredicted RBP9.15□□□□□ -0.95
RPA1-207ENST00000574049 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.95
RPA1-207ENST00000574049 ATXN8OSP0DMR3 200 aa9.15□□□□□ -0.95
RPA1-207ENST00000574049 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.95
RPA1-207ENST00000574049 PPFIA3O75145 1194 aa9.14□□□□□ -0.95
RPA1-207ENST00000574049 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
RPA1-207ENST00000574049 LRRFIP2Q9Y608 721 aaKnown RBP9.14□□□□□ -0.95
RPA1-207ENST00000574049 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
RPA1-207ENST00000574049 KCNQ2O43526 872 aa9.14□□□□□ -0.95
RPA1-207ENST00000574049 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
RPA1-207ENST00000574049 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
RPA1-207ENST00000574049 RRP9O43818 475 aaKnown RBP9.13□□□□□ -0.95
RPA1-207ENST00000574049 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 PIGBQ92521 554 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
RPA1-207ENST00000574049 CCT4P50991 539 aaKnown RBP9.13□□□□□ -0.95
RPA1-207ENST00000574049 SMIM5Q71RC9 77 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 GNAI2P04899 355 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 UNC5CLQ8IV45 518 aa9.13□□□□□ -0.95
RPA1-207ENST00000574049 UPF3BQ9BZI7 483 aaKnown RBP9.13□□□□□ -0.95
RPA1-207ENST00000574049 APPP05067 770 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 IQSEC2Q5JU85 1478 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 SRGAP3O43295 1099 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 STARD3NLO95772 234 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 AFF2P51816 1311 aa9.12□□□□□ -0.95
RPA1-207ENST00000574049 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
RPA1-207ENST00000574049 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
RPA1-207ENST00000574049 PHF14O94880 888 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 GNAI3P08754 354 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 G3BP1Q13283 466 aaKnown RBP eCLIP9.11□□□□□ -0.952e-7■■■□□ 14.7
RPA1-207ENST00000574049 MEGF6O75095 1541 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 STRCQ7RTU9 1775 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 PXDNQ92626 1479 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 STRCP1A6NGW2 1772 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 TTLL7Q6ZT98 887 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 CHD1LQ86WJ1 897 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 ZNF592Q92610 1267 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 GDPD2Q9HCC8 539 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 ZBTB40Q9NUA8 1239 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 HYPKQ9NX55 129 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.953e-6■■■□□ 15.8
RPA1-207ENST00000574049 CRB1P82279 1406 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 DNAJC2Q99543 621 aaKnown RBP9.11□□□□□ -0.95
RPA1-207ENST00000574049 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
RPA1-207ENST00000574049 A0A087WZG4 1122 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 NBPF7P0C2Y1 421 aaPredicted RBP9.1□□□□□ -0.95
RPA1-207ENST00000574049 ZBTB9Q96C00 473 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
RPA1-207ENST00000574049 PTPRCP08575 1304 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 PEAK1Q9H792 1746 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 AKAP12Q02952 1782 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 REC8O95072 547 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 CEBPZQ03701 1054 aaKnown RBP9.1□□□□□ -0.95
RPA1-207ENST00000574049 KIF6Q6ZMV9 814 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 STK3Q13188 491 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 C16orf71Q8IYS4 520 aaPredicted RBP9.1□□□□□ -0.95
RPA1-207ENST00000574049 ARHGAP45Q92619 1136 aa9.1□□□□□ -0.95
RPA1-207ENST00000574049 KSR2Q6VAB6 950 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 ZHX1Q9UKY1 873 aaPredicted RBP9.09□□□□□ -0.95
RPA1-207ENST00000574049 CAMTA1Q9Y6Y1 1673 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 ESPNB1AK53 854 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 INTS3Q68E01 1043 aaKnown RBP9.09□□□□□ -0.95
RPA1-207ENST00000574049 MARCH10Q8NA82 808 aaPredicted RBP9.09□□□□□ -0.95
RPA1-207ENST00000574049 CPDO75976 1380 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 JCADQ9P266 1359 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 CDC45O75419 566 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 CCDC24Q8N4L8 307 aa9.09□□□□□ -0.95
RPA1-207ENST00000574049 PA2G4Q9UQ80 394 aaKnown RBP9.09□□□□□ -0.95
RPA1-207ENST00000574049 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 NWD1Q149M9 1564 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 MED1Q15648 1581 aaPredicted RBP9.08□□□□□ -0.96
RPA1-207ENST00000574049 CWC27Q6UX04 472 aaKnown RBP9.08□□□□□ -0.96
RPA1-207ENST00000574049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
RPA1-207ENST00000574049 SEPT12Q8IYM1 358 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 H3BQV1 296 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 MCM4P33991 863 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 RRAGDQ9NQL2 400 aaPredicted RBP9.08□□□□□ -0.96
RPA1-207ENST00000574049 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
RPA1-207ENST00000574049 SPATA31A1Q5TZJ5 1347 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 FIBPO43427 364 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
RPA1-207ENST00000574049 KIAA2012Q0VF49 1180 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms