RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
ERCC4-204ENST00000573018 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
ERCC4-204ENST00000573018 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
ERCC4-204ENST00000573018 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
ERCC4-204ENST00000573018 SIN3BO75182 1162 aa7.77□□□□□ -1.17
ERCC4-204ENST00000573018 ALBP02768 609 aa7.77□□□□□ -1.17
ERCC4-204ENST00000573018 NEUROD4Q9HD90 331 aa7.77□□□□□ -1.17
ERCC4-204ENST00000573018 SCHIP1Q9P0W5 487 aaPredicted RBP7.77□□□□□ -1.17
ERCC4-204ENST00000573018 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
ERCC4-204ENST00000573018 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 BACH1O14867 736 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 PSME1Q06323 249 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 TRIM28Q13263 835 aaKnown RBP7.76□□□□□ -1.17
ERCC4-204ENST00000573018 PRSS36Q5K4E3 855 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 MICALL1Q8N3F8 863 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 ZNF358Q9NW07 568 aa7.76□□□□□ -1.17
ERCC4-204ENST00000573018 EML1O00423 815 aa7.75□□□□□ -1.17
ERCC4-204ENST00000573018 NOS2P35228 1153 aa7.75□□□□□ -1.17
ERCC4-204ENST00000573018 GTF2IP78347 998 aa7.75□□□□□ -1.17
ERCC4-204ENST00000573018 WASHC4Q2M389 1173 aa7.75□□□□□ -1.17
ERCC4-204ENST00000573018 EML3Q32P44 896 aa7.75□□□□□ -1.17
ERCC4-204ENST00000573018 ADH7P40394 386 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 TEAD4Q15561 434 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 ARTNQ5T4W7 220 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 SH3PXD2AQ5TCZ1 1133 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 KRTAP1-3Q8IUG1 177 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 SLC9A9Q8IVB4 645 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 TNFRSF25Q93038 417 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 NACC1Q96RE7 527 aa7.74□□□□□ -1.17
ERCC4-204ENST00000573018 SKIP12755 728 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 NID1P14543 1247 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 SPEM2Q0P670 501 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 TNS4Q8IZW8 715 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 RHPN1Q8TCX5 695 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
ERCC4-204ENST00000573018 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
ERCC4-204ENST00000573018 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
ERCC4-204ENST00000573018 PRDM6Q9NQX0 595 aa7.72□□□□□ -1.17
ERCC4-204ENST00000573018 EPHA4P54764 986 aa7.71□□□□□ -1.18
ERCC4-204ENST00000573018 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
ERCC4-204ENST00000573018 C7orf43Q8WVR3 580 aa7.71□□□□□ -1.18
ERCC4-204ENST00000573018 HSH2DQ96JZ2 352 aa7.71□□□□□ -1.18
ERCC4-204ENST00000573018 BRD7Q9NPI1 651 aa7.71□□□□□ -1.18
ERCC4-204ENST00000573018 SERTM1A2A2V5 107 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 SOX11P35716 441 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 NCOA4Q13772 614 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 C20orf204Q6ZNR8 217 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 CEP63Q96MT8 703 aa7.7□□□□□ -1.18
ERCC4-204ENST00000573018 SFI1A8K8P3 1242 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 LILRB5O75023 590 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 SELPP16109 830 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 MBTPS1Q14703 1052 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 BHMTQ93088 406 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 IGFLR1Q9H665 355 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 HCN4Q9Y3Q4 1203 aa7.68□□□□□ -1.18
ERCC4-204ENST00000573018 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
ERCC4-204ENST00000573018 A0A0A0MRY4 1105 aa7.67□□□□□ -1.18
ERCC4-204ENST00000573018 C9orf172C9J069 976 aa7.67□□□□□ -1.18
ERCC4-204ENST00000573018 ADGRE1Q14246 886 aa7.67□□□□□ -1.18
ERCC4-204ENST00000573018 SHISA2Q6UWI4 295 aa7.67□□□□□ -1.18
ERCC4-204ENST00000573018 ZNF280CQ8ND82 737 aa7.67□□□□□ -1.18
ERCC4-204ENST00000573018 UBE2OQ9C0C9 1292 aaKnown RBP7.67□□□□□ -1.18
ERCC4-204ENST00000573018 NUDT8Q8WV74 236 aa7.66□□□□□ -1.18
ERCC4-204ENST00000573018 PHACTR1Q9C0D0 580 aa7.66□□□□□ -1.18
ERCC4-204ENST00000573018 TSPAN10Q9H1Z9 355 aaPredicted RBP7.66□□□□□ -1.18
ERCC4-204ENST00000573018 KCNH4Q9UQ05 1017 aa7.66□□□□□ -1.18
ERCC4-204ENST00000573018 H2AFB1P0C5Y9 115 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 H2AFB2P0C5Z0 115 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 ELNP15502 786 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 TYRO3Q06418 890 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 TXNRD3Q86VQ6 643 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 TPCN2Q8NHX9 752 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 JPH1Q9HDC5 661 aaPredicted RBP7.65□□□□□ -1.18
ERCC4-204ENST00000573018 KIAA1024Q9UPX6 916 aa7.65□□□□□ -1.18
ERCC4-204ENST00000573018 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
ERCC4-204ENST00000573018 LZTS3O60299 673 aaPredicted RBP7.64□□□□□ -1.19
ERCC4-204ENST00000573018 PSMA6P60900 246 aaKnown RBP7.64□□□□□ -1.19
ERCC4-204ENST00000573018 LRP8Q14114 963 aa7.64□□□□□ -1.19
ERCC4-204ENST00000573018 TP53INP1Q96A56 240 aa7.64□□□□□ -1.19
ERCC4-204ENST00000573018 ANKIB1Q9P2G1 1089 aa7.64□□□□□ -1.19
ERCC4-204ENST00000573018 SLC6A14Q9UN76 642 aa7.64□□□□□ -1.19
ERCC4-204ENST00000573018 HYAL3O43820 417 aaPredicted RBP7.63□□□□□ -1.19
ERCC4-204ENST00000573018 KCNQ4P56696 695 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 RAC1P63000 192 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 MCM6Q14566 821 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 C1orf53Q5VUE5 145 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
ERCC4-204ENST00000573018 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 ALG2Q9H553 416 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 USP21Q9UK80 565 aa7.63□□□□□ -1.19
ERCC4-204ENST00000573018 CCDC102BQ68D86 513 aa7.62□□□□□ -1.19
ERCC4-204ENST00000573018 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
ERCC4-204ENST00000573018 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
ERCC4-204ENST00000573018 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
ERCC4-204ENST00000573018 DMRTC2Q8IXT2 367 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms