RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 METTL22Q9BUU2 404 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 TEX13AQ9BXU3 409 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 ATG3Q9NT62 314 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 ZBTB47Q9UFB7 747 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 PNMA6EA0A0J9YXQ4 647 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 PTCD1O75127 700 aaKnown RBP7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NBPF7P0C2Y1 421 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NEXNQ0ZGT2 675 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 MTX1Q13505 466 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 POLA2Q14181 598 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 VPS72Q15906 364 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NBPF10Q6P3W6 841 aaKnown RBP7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NBPF15Q8N660 670 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 PLBD2Q8NHP8 589 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 C9orf78Q9NZ63 289 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 ASAP1Q9ULH1 1129 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 LAMB2P55268 1798 aa7.63□□□□□ -1.19
TRAPPC1-204ENST00000571947 NEURL1BA8MQ27 555 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 GRM8O00222 908 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 IGKV5-2P06315 115 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 PIP4K2AP48426 406 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 CWF19L2Q2TBE0 894 aaKnown RBP7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 BMP2KLQ5H9B9 411 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 PPP1R42Q7Z4L9 355 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 MARCH10Q8NA82 808 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 NGLY1Q96IV0 654 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 MYD88Q99836 296 aa7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
TRAPPC1-204ENST00000571947 COL15A1P39059 1388 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 MYH7P12883 1935 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 SMARCA5O60264 1052 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 A1BGP04217 495 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 GCKRQ14397 625 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 NPM2Q86SE8 214 aaKnown RBP7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 DNAJC10Q8IXB1 793 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 C8orf37Q96NL8 207 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 LRRCC1Q9C099 1032 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 EXOC6BQ9Y2D4 811 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 SPEF2Q9C093 1822 aa7.61□□□□□ -1.19
TRAPPC1-204ENST00000571947 SALL3Q9BXA9 1300 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 APBB1O00213 710 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 SRGAP3O43295 1099 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 SEC24BO95487 1268 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 STARD3NLO95772 234 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 PRIM1P49642 420 aaKnown RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 HSP90AB4PQ58FF6 505 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 TTC22Q5TAA0 569 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 TTLL7Q6ZT98 887 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 C16orf71Q8IYS4 520 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 KAZALD1Q96I82 304 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 SUCLG2Q96I99 432 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 IPO9Q96P70 1041 aaKnown RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 RBM42Q9BTD8 480 aaKnown RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 NOP58Q9Y2X3 529 aaKnown RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 DDX60Q8IY21 1712 aaKnown RBP7.6□□□□□ -1.19
TRAPPC1-204ENST00000571947 SURF6O75683 361 aaKnown RBP7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 CYP19A1P11511 503 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 HSPA1LP34931 641 aa7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 OTUD7AQ8TE49 926 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 USP21Q9UK80 565 aa7.59□□□□□ -1.19
TRAPPC1-204ENST00000571947 SCN7AQ01118 1682 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 ATP5J2-PTCD1G3V325 749 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 H7C1W4 665 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 GSPT1P15170 499 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 PDE1AP54750 535 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 CASP7P55210 303 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 SAMD1Q6SPF0 538 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 KIF1BPQ96EK5 621 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 ISCA1Q9BUE6 129 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 BICC1Q9H694 974 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 UPF2Q9HAU5 1272 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 STAP2Q9UGK3 403 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 ATRNO75882 1429 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 A0A1B0GUL6 1792 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 C4AP0C0L4 1744 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 C4BP0C0L5 1744 aa7.58□□□□□ -1.2
TRAPPC1-204ENST00000571947 AOX1Q06278 1338 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 MAP3K15Q6ZN16 1313 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 A0A087WZG4 1122 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 EIF5BO60841 1220 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 CDC45O75419 566 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 RABL6Q3YEC7 729 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 KIF6Q6ZMV9 814 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 ERC1Q8IUD2 1116 aa7.57□□□□□ -1.2
TRAPPC1-204ENST00000571947 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms