RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
EDC3-218ENST00000570138 LRRFIP2Q9Y608 721 aaKnown RBP11.44□□□□□ -0.58
EDC3-218ENST00000570138 PALLDQ8WX93 1383 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 C5P01031 1676 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 NEURL1BA8MQ27 555 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 HMMRO75330 724 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 RGS3P49796 1198 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
EDC3-218ENST00000570138 INTS5Q6P9B9 1019 aaKnown RBP11.43□□□□□ -0.58
EDC3-218ENST00000570138 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
EDC3-218ENST00000570138 UTYO14607 1347 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 UBR2Q8IWV8 1755 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 ATP5J2-PTCD1G3V325 749 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 GRM8O00222 908 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 NUCB1Q02818 461 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 GCKRQ14397 625 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 CCDC87Q9NVE4 849 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 HDAC5Q9UQL6 1122 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 ZBTB1Q9Y2K1 713 aa11.42□□□□□ -0.58
EDC3-218ENST00000570138 ZNF330Q9Y3S2 320 aaPredicted RBP11.42□□□□□ -0.58
EDC3-218ENST00000570138 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
EDC3-218ENST00000570138 IL6STP40189 918 aaPredicted RBP11.41□□□□□ -0.58
EDC3-218ENST00000570138 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
EDC3-218ENST00000570138 TCIRG1Q13488 830 aa11.41□□□□□ -0.58
EDC3-218ENST00000570138 KIF6Q6ZMV9 814 aa11.41□□□□□ -0.58
EDC3-218ENST00000570138 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
EDC3-218ENST00000570138 ITGB4P16144 1822 aa11.41□□□□□ -0.58
EDC3-218ENST00000570138 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 PDE4AP27815 886 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 EIF5P55010 431 aaKnown RBP11.4□□□□□ -0.58
EDC3-218ENST00000570138 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 JARID2Q92833 1246 aaPredicted RBP11.4□□□□□ -0.58
EDC3-218ENST00000570138 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 ARXQ96QS3 562 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
EDC3-218ENST00000570138 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
EDC3-218ENST00000570138 MAP3K15Q6ZN16 1313 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 H7C1W4 665 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
EDC3-218ENST00000570138 POLA2Q14181 598 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 CCDC191Q8NCU4 936 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 LINC00116Q8NCU8 138 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 KAZALD1Q96I82 304 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 LNPKQ9C0E8 428 aa11.39□□□□□ -0.59
EDC3-218ENST00000570138 A0A087WZG4 1122 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 ERVV-1B6SEH8 477 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 CASP7P55210 303 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 KCNQ4P56696 695 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 MTX1Q13505 466 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 HLFQ16534 295 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
EDC3-218ENST00000570138 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
EDC3-218ENST00000570138 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
EDC3-218ENST00000570138 CWC25Q9NXE8 425 aaPredicted RBP11.38□□□□□ -0.59
EDC3-218ENST00000570138 TBC1D2BQ9UPU7 963 aa11.38□□□□□ -0.59
EDC3-218ENST00000570138 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
EDC3-218ENST00000570138 LAMB4A4D0S4 1761 aa11.37□□□□□ -0.59
EDC3-218ENST00000570138 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
EDC3-218ENST00000570138 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
EDC3-218ENST00000570138 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
EDC3-218ENST00000570138 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
EDC3-218ENST00000570138 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
EDC3-218ENST00000570138 UBE3BQ7Z3V4 1068 aa11.36□□□□□ -0.59
EDC3-218ENST00000570138 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
EDC3-218ENST00000570138 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
EDC3-218ENST00000570138 EXOC6BQ9Y2D4 811 aa11.36□□□□□ -0.59
EDC3-218ENST00000570138 APBB1O00213 710 aa11.35□□□□□ -0.59
EDC3-218ENST00000570138 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
EDC3-218ENST00000570138 RAB11FIP3O75154 756 aa11.35□□□□□ -0.59
EDC3-218ENST00000570138 RPS6KA4O75676 772 aa11.35□□□□□ -0.59
EDC3-218ENST00000570138 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
EDC3-218ENST00000570138 TRIM37O94972 964 aa11.35□□□□□ -0.59
EDC3-218ENST00000570138 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
EDC3-218ENST00000570138 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
EDC3-218ENST00000570138 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
EDC3-218ENST00000570138 COL15A1P39059 1388 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 CAMTA2O94983 1202 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 GPTP24298 496 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 FOXO4P98177 505 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 NLRP10Q86W26 655 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 BACH2Q9BYV9 841 aa11.34□□□□□ -0.59
EDC3-218ENST00000570138 TJP1Q07157 1748 aa11.33□□□□□ -0.6
EDC3-218ENST00000570138 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
EDC3-218ENST00000570138 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
EDC3-218ENST00000570138 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
EDC3-218ENST00000570138 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
EDC3-218ENST00000570138 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
EDC3-218ENST00000570138 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
EDC3-218ENST00000570138 LRRCC1Q9C099 1032 aa11.33□□□□□ -0.6
EDC3-218ENST00000570138 LMBR1LQ6UX01 489 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms