RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 METTL22Q9BUU2 404 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-217ENST00000570001 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
PDXDC1-217ENST00000570001 CSPP1Q1MSJ5 1256 aa14.01□□□□□ -0.17
PDXDC1-217ENST00000570001 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
PDXDC1-217ENST00000570001 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 CASTP20810 708 aaKnown RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 PRPF40BQ6NWY9 871 aaKnown RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 SUCLG2Q96I99 432 aa14□□□□□ -0.17
PDXDC1-217ENST00000570001 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
PDXDC1-217ENST00000570001 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 PRPF40AO75400 957 aaKnown RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 ANAPC15P60006 121 aa14□□□□□ -0.17
PDXDC1-217ENST00000570001 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
PDXDC1-217ENST00000570001 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 BRPF3Q9ULD4 1205 aa13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 GTF2E1P29083 439 aaPredicted RBP13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
PDXDC1-217ENST00000570001 EXOC5O00471 708 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 MRE11P49959 708 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 GCKRQ14397 625 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 CCDC158Q5M9N0 1113 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 LMBR1LQ6UX01 489 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 ADAMTS2O95450 1211 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 CAVIN1Q6NZI2 390 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
PDXDC1-217ENST00000570001 FAM177BA6PVY3 158 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 PHF14O94880 888 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 RAB3GAP1Q15042 981 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
PDXDC1-217ENST00000570001 TTC39AQ5SRH9 613 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 CNNM1Q9NRU3 951 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 KLHDC4Q8TBB5 520 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 KIF3AQ9Y496 699 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 TNS3Q68CZ2 1445 aa13.96□□□□□ -0.17
PDXDC1-217ENST00000570001 H3BQV1 296 aa13.96□□□□□ -0.18
PDXDC1-217ENST00000570001 IFFO2Q5TF58 517 aa13.96□□□□□ -0.18
PDXDC1-217ENST00000570001 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.18
PDXDC1-217ENST00000570001 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDXDC1-217ENST00000570001 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
PDXDC1-217ENST00000570001 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
PDXDC1-217ENST00000570001 BAG4O95429 457 aaKnown RBP13.95□□□□□ -0.18
PDXDC1-217ENST00000570001 CYP27B1O15528 508 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 A1BGP04217 495 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 ANKRD1Q15327 319 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 ZSCAN31Q96LW9 406 aaPredicted RBP13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 PIK3C2AO00443 1686 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 POLA2Q14181 598 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 PEAK1Q9H792 1746 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 MBD3O95983 291 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 GPTP24298 496 aa13.94□□□□□ -0.18
PDXDC1-217ENST00000570001 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 RGPD8O14715 1765 aaPredicted RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 APPP05067 770 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 RGS12O14924 1447 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 SGSM2O43147 1006 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 TOPAZ1Q8N9V7 1692 aa13.93□□□□□ -0.18
PDXDC1-217ENST00000570001 TFCP2Q12800 502 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 KRT32Q14532 448 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 CCDC83Q8IWF9 413 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 ADCY9O60503 1353 aa13.92□□□□□ -0.18
PDXDC1-217ENST00000570001 NMIQ13287 307 aaPredicted RBP13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 PDCP20941 246 aa13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 STK3Q13188 491 aa13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms