RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
RPAP1-212ENST00000569829 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.21
RPAP1-212ENST00000569829 LDHDQ86WU2 507 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 CNBD1Q8NA66 436 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
RPAP1-212ENST00000569829 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.22
RPAP1-212ENST00000569829 A0A087WZG4 1122 aa13.7□□□□□ -0.22
RPAP1-212ENST00000569829 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
RPAP1-212ENST00000569829 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
RPAP1-212ENST00000569829 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
RPAP1-212ENST00000569829 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
RPAP1-212ENST00000569829 ZNF790Q6PG37 636 aa13.7□□□□□ -0.22
RPAP1-212ENST00000569829 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
RPAP1-212ENST00000569829 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 NPHP1O15259 732 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-212ENST00000569829 STYK1Q6J9G0 422 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 CNKSR1Q969H4 720 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 AIDAQ96BJ3 306 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-212ENST00000569829 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
RPAP1-212ENST00000569829 SLC34A2O95436 690 aa13.68□□□□□ -0.22
RPAP1-212ENST00000569829 DZIP3Q86Y13 1208 aaKnown RBP13.68□□□□□ -0.22
RPAP1-212ENST00000569829 ABHD8Q96I13 439 aa13.68□□□□□ -0.22
RPAP1-212ENST00000569829 SCN4AP35499 1836 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 IQCA1LA6NCM1 817 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
RPAP1-212ENST00000569829 EPHX2P34913 555 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 ST5P78524 1137 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
RPAP1-212ENST00000569829 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 ADAMTSL1Q8N6G6 1762 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 ARFGEF2Q9Y6D5 1785 aa13.67□□□□□ -0.22
RPAP1-212ENST00000569829 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
RPAP1-212ENST00000569829 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 TEFQ10587 303 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 CCDC93Q567U6 631 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 HACL1Q9UJ83 578 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 COL4A5P29400 1685 aa13.66□□□□□ -0.22
RPAP1-212ENST00000569829 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
RPAP1-212ENST00000569829 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPAP1-212ENST00000569829 GRM1Q13255 1194 aa13.65□□□□□ -0.22
RPAP1-212ENST00000569829 NBPF5PQ86XG9 351 aaPredicted RBP13.65□□□□□ -0.22
RPAP1-212ENST00000569829 NPC1L1Q9UHC9 1359 aa13.65□□□□□ -0.22
RPAP1-212ENST00000569829 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
RPAP1-212ENST00000569829 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
RPAP1-212ENST00000569829 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
RPAP1-212ENST00000569829 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
RPAP1-212ENST00000569829 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
RPAP1-212ENST00000569829 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
RPAP1-212ENST00000569829 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
RPAP1-212ENST00000569829 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
RPAP1-212ENST00000569829 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
RPAP1-212ENST00000569829 HLFQ16534 295 aa13.63□□□□□ -0.23
RPAP1-212ENST00000569829 GJA3Q9Y6H8 435 aa13.63□□□□□ -0.23
RPAP1-212ENST00000569829 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 FZD9O00144 591 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 TRAF5O00463 557 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 NPR1P16066 1061 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 IARSP41252 1262 aaKnown RBP13.62□□□□□ -0.23
RPAP1-212ENST00000569829 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 CYP4F22Q6NT55 531 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
RPAP1-212ENST00000569829 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
RPAP1-212ENST00000569829 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
RPAP1-212ENST00000569829 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
RPAP1-212ENST00000569829 KLRG2A4D1S0 409 aaPredicted RBP13.61□□□□□ -0.23
RPAP1-212ENST00000569829 EPS15P42566 896 aa13.61□□□□□ -0.23
RPAP1-212ENST00000569829 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
RPAP1-212ENST00000569829 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
RPAP1-212ENST00000569829 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
RPAP1-212ENST00000569829 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
RPAP1-212ENST00000569829 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
RPAP1-212ENST00000569829 AOC2O75106 756 aa13.6□□□□□ -0.23
RPAP1-212ENST00000569829 DCTN1Q14203 1278 aa13.6□□□□□ -0.23
RPAP1-212ENST00000569829 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
RPAP1-212ENST00000569829 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 ABCC12Q96J65 1359 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 SCNN1DP51172 638 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 CST9Q5W186 159 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 MCM10Q7L590 875 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 GAS2L2Q8NHY3 880 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
RPAP1-212ENST00000569829 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
RPAP1-212ENST00000569829 MAP2K1Q02750 393 aaPredicted RBP13.58□□□□□ -0.24
RPAP1-212ENST00000569829 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
RPAP1-212ENST00000569829 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
RPAP1-212ENST00000569829 GPC2Q8N158 579 aa13.58□□□□□ -0.24
RPAP1-212ENST00000569829 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
RPAP1-212ENST00000569829 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms