RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 GSPT1P15170 499 aaKnown RBP7.04□□□□□ -1.28
CDH13-213ENST00000569454 TIE1P35590 1138 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 SLC4A3P48751 1232 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 MTX1Q13505 466 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 LRRC59Q96AG4 307 aaKnown RBP7.04□□□□□ -1.28
CDH13-213ENST00000569454 ANTXR1Q9H6X2 564 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 STAP2Q9UGK3 403 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 STRCP1A6NGW2 1772 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 RGPD2P0DJD1 1756 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 COL18A1P39060 1754 aa7.04□□□□□ -1.28
CDH13-213ENST00000569454 SCN11AQ9UI33 1791 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 DLL1O00548 723 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 MX1P20591 662 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 MCCP23508 829 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 PDE1AP54750 535 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 ERC1Q8IUD2 1116 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 IFNL2Q8IZJ0 200 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 KIF12Q96FN5 646 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 DCAF5Q96JK2 942 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
CDH13-213ENST00000569454 CHPF2Q9P2E5 772 aa7.03□□□□□ -1.28
CDH13-213ENST00000569454 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
CDH13-213ENST00000569454 SALL3Q9BXA9 1300 aa7.02□□□□□ -1.28
CDH13-213ENST00000569454 K7ELQ4 463 aaPredicted RBP7.02□□□□□ -1.29
CDH13-213ENST00000569454 ERC2O15083 957 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 SDSP20132 328 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 XPCQ01831 940 aaPredicted RBP7.02□□□□□ -1.29
CDH13-213ENST00000569454 GSE1Q14687 1217 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 BEND3Q5T5X7 828 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 KSR2Q6VAB6 950 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 MPRIPQ6WCQ1 1025 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 CCDC125Q86Z20 511 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 LINS1Q8NG48 757 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 KIF1BPQ96EK5 621 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 GPATCH3Q96I76 525 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 USP44Q9H0E7 712 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 BCL11AQ9H165 835 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 LGR6Q9HBX8 967 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 DDX21Q9NR30 783 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDH13-213ENST00000569454 NLRP2Q9NX02 1062 aa7.02□□□□□ -1.29
CDH13-213ENST00000569454 LRRFIP2Q9Y608 721 aaKnown RBP7.02□□□□□ -1.29
CDH13-213ENST00000569454 KDM6AO15550 1401 aaPredicted RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 MEGF6O75095 1541 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 LAMB4A4D0S4 1761 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 BCL9LQ86UU0 1499 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 ADCY9O60503 1353 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 COL15A1P39059 1388 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 PI4KAP2A4QPH2 592 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 ST18O60284 1047 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 HSP90AA1P07900 732 aaKnown RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 CSB-PGBD3P0DP91 1061 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 PHKG2P15735 406 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 EIF2S2P20042 333 aaKnown RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 MCM2P49736 904 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 ANAPC15P60006 121 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 NEXNQ0ZGT2 675 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 ZNF790Q6PG37 636 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 SPNS2Q8IVW8 549 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 TTC5Q8N0Z6 440 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 PI4KAP1Q8N8J0 262 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 SLKQ9H2G2 1235 aaPredicted RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 AXIN2Q9Y2T1 843 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 UTYO14607 1347 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 TTC41PQ6P2S7 1318 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 PCDH11XQ9BZA7 1347 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 PCDH11YQ9BZA8 1340 aa7.01□□□□□ -1.29
CDH13-213ENST00000569454 USP42Q9H9J4 1324 aaKnown RBP7.01□□□□□ -1.29
CDH13-213ENST00000569454 TUBGCP6Q96RT7 1819 aa7□□□□□ -1.29
CDH13-213ENST00000569454 PNMA6EA0A0J9YXQ4 647 aa7□□□□□ -1.29
CDH13-213ENST00000569454 SRGAP3O43295 1099 aa7□□□□□ -1.29
CDH13-213ENST00000569454 ZC3H6P61129 1189 aaKnown RBP7□□□□□ -1.29
CDH13-213ENST00000569454 LARP1Q6PKG0 1096 aaKnown RBP7□□□□□ -1.29
CDH13-213ENST00000569454 NECTIN2Q92692 538 aa7□□□□□ -1.29
CDH13-213ENST00000569454 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
CDH13-213ENST00000569454 EXOC6BQ9Y2D4 811 aa7□□□□□ -1.29
CDH13-213ENST00000569454 RGPD5Q99666 1765 aa7□□□□□ -1.29
CDH13-213ENST00000569454 WDR17Q8IZU2 1322 aa7□□□□□ -1.29
CDH13-213ENST00000569454 XIRP1Q702N8 1843 aaKnown RBP6.99□□□□□ -1.29
CDH13-213ENST00000569454 ABCA3Q99758 1704 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 FRAT2O75474 233 aaPredicted RBP6.99□□□□□ -1.29
CDH13-213ENST00000569454 PLEKHG5O94827 1062 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
CDH13-213ENST00000569454 DDIT3P35638 169 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 IER5LQ5T953 404 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 BRINP3Q76B58 766 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 PPP1R42Q7Z4L9 355 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 IL17RAQ96F46 866 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 FMNL2Q96PY5 1086 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 KIF2CQ99661 725 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 USP26Q9BXU7 913 aa6.99□□□□□ -1.29
CDH13-213ENST00000569454 C9orf78Q9NZ63 289 aaPredicted RBP6.99□□□□□ -1.29
CDH13-213ENST00000569454 ISY1Q9ULR0 285 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms