RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
CHRFAM7A-206ENST00000569278 GLTPD2A6NH11 291 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 KCNQ3O43525 872 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 TTLL6Q8N841 843 aa15.09■□□□□ 0.01
CHRFAM7A-206ENST00000569278 ZNF790Q6PG37 636 aa15.08■□□□□ 0
CHRFAM7A-206ENST00000569278 BICDL1Q6ZP65 573 aa15.08■□□□□ 0
CHRFAM7A-206ENST00000569278 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-206ENST00000569278 CAMTA2O94983 1202 aa15.07■□□□□ 0
CHRFAM7A-206ENST00000569278 SMC1BQ8NDV3 1235 aa15.07■□□□□ 0
CHRFAM7A-206ENST00000569278 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
CHRFAM7A-206ENST00000569278 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CHRFAM7A-206ENST00000569278 PHACTR3Q96KR7 559 aa15.06■□□□□ 0
CHRFAM7A-206ENST00000569278 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
CHRFAM7A-206ENST00000569278 A1BGP04217 495 aa15.05■□□□□ -0
CHRFAM7A-206ENST00000569278 RSPH6AQ9H0K4 717 aa15.05■□□□□ -0
CHRFAM7A-206ENST00000569278 LAMB4A4D0S4 1761 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 ADAMTSL1Q8N6G6 1762 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 H0YIN7 160 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 STARD3NLO95772 234 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 IL6STP40189 918 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 MIER1Q8N108 512 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 BRIP1Q9BX63 1249 aa15.04■□□□□ -0
CHRFAM7A-206ENST00000569278 SNED1Q8TER0 1413 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 C21orf2O43822 256 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 POTEIP0CG38 1075 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 POTEJP0CG39 1038 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 VEGFAP15692 232 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 CREBZFQ9NS37 354 aa15.03■□□□□ -0
CHRFAM7A-206ENST00000569278 A0A087WZG4 1122 aa15.02■□□□□ -0
CHRFAM7A-206ENST00000569278 CHADLQ6NUI6 762 aa15.02■□□□□ -0
CHRFAM7A-206ENST00000569278 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 SRGNP10124 158 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 TEFQ10587 303 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 C7orf43Q8WVR3 580 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 ZNF330Q9Y3S2 320 aaPredicted RBP15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
CHRFAM7A-206ENST00000569278 COL4A5P29400 1685 aa15□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PLCD3Q8N3E9 789 aa15□□□□□ -0.01
CHRFAM7A-206ENST00000569278 CNBD1Q8NA66 436 aa15□□□□□ -0.01
CHRFAM7A-206ENST00000569278 NBPF26B4DH59 902 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 HSPA1AP0DMV8 641 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 HSPA1BP0DMV9 641 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PDE6BP35913 854 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 ERFEQ4G0M1 354 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 NBPF10Q6P3W6 841 aaKnown RBP14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 NBPF15Q8N660 670 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 DLG5Q8TDM6 1919 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 SCN4AP35499 1836 aa14.99□□□□□ -0.01
CHRFAM7A-206ENST00000569278 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-206ENST00000569278 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
CHRFAM7A-206ENST00000569278 OLFM4Q6UX06 510 aa14.98□□□□□ -0.01
CHRFAM7A-206ENST00000569278 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-206ENST00000569278 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-206ENST00000569278 KLRG2A4D1S0 409 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 MCM10Q7L590 875 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 SLC51AQ86UW1 340 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 LTBP1Q14766 1721 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 ABCC12Q96J65 1359 aa14.97□□□□□ -0.01
CHRFAM7A-206ENST00000569278 ZNF541Q9H0D2 1346 aa14.96□□□□□ -0.01
CHRFAM7A-206ENST00000569278 DCTN1Q14203 1278 aa14.96□□□□□ -0.01
CHRFAM7A-206ENST00000569278 SETDB2Q96T68 719 aa14.96□□□□□ -0.01
CHRFAM7A-206ENST00000569278 PASKQ96RG2 1323 aa14.95□□□□□ -0.02
CHRFAM7A-206ENST00000569278 CNKSR1Q969H4 720 aa14.95□□□□□ -0.02
CHRFAM7A-206ENST00000569278 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
CHRFAM7A-206ENST00000569278 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
CHRFAM7A-206ENST00000569278 ST5P78524 1137 aa14.94□□□□□ -0.02
CHRFAM7A-206ENST00000569278 NUP98P52948 1817 aa14.94□□□□□ -0.02
CHRFAM7A-206ENST00000569278 PPP2R1AP30153 589 aa14.93□□□□□ -0.02
CHRFAM7A-206ENST00000569278 HLFQ16534 295 aa14.93□□□□□ -0.02
CHRFAM7A-206ENST00000569278 CLEC4GQ6UXB4 293 aa14.93□□□□□ -0.02
CHRFAM7A-206ENST00000569278 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
CHRFAM7A-206ENST00000569278 DPY19L2Q6NUT2 758 aa14.92□□□□□ -0.02
CHRFAM7A-206ENST00000569278 NBPF5PQ86XG9 351 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-206ENST00000569278 TAF1DQ9H5J8 278 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-206ENST00000569278 CNTNAP1P78357 1384 aa14.92□□□□□ -0.02
CHRFAM7A-206ENST00000569278 SNRPA1P09661 255 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-206ENST00000569278 ZNF277Q9NRM2 450 aaPredicted RBP14.91□□□□□ -0.02
CHRFAM7A-206ENST00000569278 MKRN1Q9UHC7 482 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-206ENST00000569278 THSD7BQ9C0I4 1608 aa14.91□□□□□ -0.02
CHRFAM7A-206ENST00000569278 RGL2O15211 777 aa14.9□□□□□ -0.02
CHRFAM7A-206ENST00000569278 ITGBL1O95965 494 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-206ENST00000569278 NPR1P16066 1061 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms