RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
CNOT1-217ENST00000569263 ANKRD36CQ5JPF3 1778 aa16.76■□□□□ 0.27
CNOT1-217ENST00000569263 ARFGEF2Q9Y6D5 1785 aa16.76■□□□□ 0.27
CNOT1-217ENST00000569263 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
CNOT1-217ENST00000569263 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
CNOT1-217ENST00000569263 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
CNOT1-217ENST00000569263 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
CNOT1-217ENST00000569263 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
CNOT1-217ENST00000569263 MAP3K15Q6ZN16 1313 aa16.74■□□□□ 0.27
CNOT1-217ENST00000569263 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
CNOT1-217ENST00000569263 FKBP8Q14318 412 aa16.74■□□□□ 0.27
CNOT1-217ENST00000569263 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
CNOT1-217ENST00000569263 PHAXQ9H814 394 aaKnown RBP16.73■□□□□ 0.27
CNOT1-217ENST00000569263 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
CNOT1-217ENST00000569263 ERVV-1B6SEH8 477 aa16.72■□□□□ 0.27
CNOT1-217ENST00000569263 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
CNOT1-217ENST00000569263 MMP10P09238 476 aa16.72■□□□□ 0.27
CNOT1-217ENST00000569263 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
CNOT1-217ENST00000569263 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
CNOT1-217ENST00000569263 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
CNOT1-217ENST00000569263 RGL2O15211 777 aa16.71■□□□□ 0.27
CNOT1-217ENST00000569263 PTGER2P43116 358 aa16.71■□□□□ 0.27
CNOT1-217ENST00000569263 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
CNOT1-217ENST00000569263 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
CNOT1-217ENST00000569263 NFIXQ14938 502 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 HLFQ16534 295 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
CNOT1-217ENST00000569263 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 FLIIQ13045 1269 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
CNOT1-217ENST00000569263 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
CNOT1-217ENST00000569263 G2E3Q7L622 706 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 SETDB2Q96T68 719 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 SMC4Q9NTJ3 1288 aa16.69■□□□□ 0.26
CNOT1-217ENST00000569263 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
CNOT1-217ENST00000569263 DDR1Q08345 913 aa16.68■□□□□ 0.26
CNOT1-217ENST00000569263 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
CNOT1-217ENST00000569263 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
CNOT1-217ENST00000569263 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
CNOT1-217ENST00000569263 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
CNOT1-217ENST00000569263 NPHP1O15259 732 aa16.67■□□□□ 0.26
CNOT1-217ENST00000569263 GPTP24298 496 aa16.67■□□□□ 0.26
CNOT1-217ENST00000569263 TM4SF1P30408 202 aa16.67■□□□□ 0.26
CNOT1-217ENST00000569263 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CNOT1-217ENST00000569263 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
CNOT1-217ENST00000569263 SERPINB2P05120 415 aa16.66■□□□□ 0.26
CNOT1-217ENST00000569263 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
CNOT1-217ENST00000569263 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
CNOT1-217ENST00000569263 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
CNOT1-217ENST00000569263 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
CNOT1-217ENST00000569263 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
CNOT1-217ENST00000569263 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
CNOT1-217ENST00000569263 ADCY9O60503 1353 aa16.64■□□□□ 0.26
CNOT1-217ENST00000569263 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 PARP10Q53GL7 1025 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 NBPF5PQ86XG9 351 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-217ENST00000569263 ZNF34Q8IZ26 560 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 MYD88Q99836 296 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
CNOT1-217ENST00000569263 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
CNOT1-217ENST00000569263 CNBD1Q8NA66 436 aa16.63■□□□□ 0.25
CNOT1-217ENST00000569263 PTPRCP08575 1304 aa16.63■□□□□ 0.25
CNOT1-217ENST00000569263 UBN2Q6ZU65 1347 aa16.63■□□□□ 0.25
CNOT1-217ENST00000569263 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
CNOT1-217ENST00000569263 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-217ENST00000569263 ST5P78524 1137 aa16.62■□□□□ 0.25
CNOT1-217ENST00000569263 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
CNOT1-217ENST00000569263 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
CNOT1-217ENST00000569263 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-217ENST00000569263 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
CNOT1-217ENST00000569263 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-217ENST00000569263 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
CNOT1-217ENST00000569263 FHDC1Q9C0D6 1143 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-217ENST00000569263 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
CNOT1-217ENST00000569263 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-217ENST00000569263 F6X3S4 739 aa16.6■□□□□ 0.25
CNOT1-217ENST00000569263 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-217ENST00000569263 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
CNOT1-217ENST00000569263 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
CNOT1-217ENST00000569263 ISCA1Q9BUE6 129 aa16.6■□□□□ 0.25
CNOT1-217ENST00000569263 BCAR3O75815 825 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 SLC4A10Q6U841 1118 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 UTP14AQ9BVJ6 771 aaKnown RBP16.59■□□□□ 0.25
CNOT1-217ENST00000569263 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
CNOT1-217ENST00000569263 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 PXDNLA1KZ92 1463 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 LAMB2P55268 1798 aa16.59■□□□□ 0.25
CNOT1-217ENST00000569263 NTSR2O95665 410 aa16.58■□□□□ 0.24
CNOT1-217ENST00000569263 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
CNOT1-217ENST00000569263 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms