RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EIF4G1Q04637 1599 aaKnown RBP8.17□□□□□ -1.1
CNOT1-216ENST00000569240 KIF4AO95239 1232 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 PPP1R2P41236 205 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ZNF365Q70YC5 407 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 AQRO60306 1485 aaKnown RBP eCLIP8.17□□□□□ -1.18e-7■■■■□ 22.2
CNOT1-216ENST00000569240 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.17□□□□□ -1.16e-7■■■□□ 18.2
CNOT1-216ENST00000569240 VCX3BQ9H321 246 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 VCX3AQ9NNX9 186 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 RMND1Q9NWS8 449 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC141Q6ZP82 1450 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 IRX4P78413 519 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 LRRC27Q9C0I9 530 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 VPS18Q9P253 973 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 KRT86O43790 486 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TEFQ10587 303 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 RASAL2Q9UJF2 1139 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 NOB1Q9ULX3 412 aaKnown RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TIAM1Q13009 1591 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 PLEKHG5O94827 1062 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 FCHSD2O94868 740 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TSGA10Q9BZW7 698 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TBC1D2BQ9UPU7 963 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 NOL3O60936 208 aaKnown RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 SURF6O75683 361 aaKnown RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 DESP17661 470 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 ANKRD36BQ8N2N9 1353 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 BCAR3O75815 825 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 MCTP2Q6DN12 878 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 TEX2Q8IWB9 1127 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 FAM177A1Q8N128 213 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
CNOT1-216ENST00000569240 PHLDB2Q86SQ0 1253 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 FAM71BQ8TC56 605 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 LMBR1Q8WVP7 490 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
CNOT1-216ENST00000569240 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 KIF1BPQ96EK5 621 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 THEGQ9P2T0 379 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 U3KPZ7 1027 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 AMPHP49418 695 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 DUSP27Q5VZP5 1158 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 CNGA4Q8IV77 575 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 APLFQ8IW19 511 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-216ENST00000569240 BCL2L12Q9HB09 334 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 JRKLQ9Y4A0 524 aa8.15□□□□□ -1.1
CNOT1-216ENST00000569240 EFCAB8A8MWE9 144 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 NDC80O14777 642 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 POTEJP0CG39 1038 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 HOXA7P31268 230 aaPredicted RBP8.15□□□□□ -1.11
CNOT1-216ENST00000569240 RASSF2P50749 326 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 LRRC45Q96CN5 670 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC69A6NI79 296 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 NDUFAB1O14561 156 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC158Q5M9N0 1113 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 DRC1Q96MC2 740 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 NUCB1Q02818 461 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 MAPK8IP2Q13387 824 aaPredicted RBP8.15□□□□□ -1.11
CNOT1-216ENST00000569240 MCM6Q14566 821 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 HSP90AA5PQ58FG0 334 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 MEX3CQ5U5Q3 659 aaKnown RBP8.15□□□□□ -1.11
CNOT1-216ENST00000569240 PSMD1Q99460 953 aa8.15□□□□□ -1.11
CNOT1-216ENST00000569240 EVCP57679 992 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC102BQ68D86 513 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 MMS22LQ6ZRQ5 1243 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 MAATS1Q7Z4T9 603 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TSKSQ9UJT2 592 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 PTPRCP08575 1304 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 RALGAPBQ86X10 1494 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 CEP85LQ5SZL2 805 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TSG101Q99816 390 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TNNC1P63316 161 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 IRX1P78414 480 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TYRO3Q06418 890 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 NACAP1Q9BZK3 213 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 CWC25Q9NXE8 425 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-216ENST00000569240 GCKP35557 465 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 SMC6Q96SB8 1091 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 ACTR5Q9H9F9 607 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-216ENST00000569240 CPLX4Q7Z7G2 160 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 HYPKQ9NX55 129 aa8.14□□□□□ -1.11
CNOT1-216ENST00000569240 TRMT1Q9NXH9 659 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms