RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 CNBD1Q8NA66 436 aa20.49■□□□□ 0.87
SCAMP2-210ENST00000569124 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
SCAMP2-210ENST00000569124 ZNF219Q9P2Y4 722 aaPredicted RBP20.49■□□□□ 0.87
SCAMP2-210ENST00000569124 C21orf2O43822 256 aa20.48■□□□□ 0.87
SCAMP2-210ENST00000569124 ST5P78524 1137 aa20.47■□□□□ 0.87
SCAMP2-210ENST00000569124 ERFEQ4G0M1 354 aa20.47■□□□□ 0.87
SCAMP2-210ENST00000569124 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
SCAMP2-210ENST00000569124 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
SCAMP2-210ENST00000569124 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
SCAMP2-210ENST00000569124 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
SCAMP2-210ENST00000569124 KDM3BQ7LBC6 1761 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 BTBD11A6QL63 1104 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 CAMTA2O94983 1202 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 A1BGP04217 495 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 CNKSR1Q969H4 720 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
SCAMP2-210ENST00000569124 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
SCAMP2-210ENST00000569124 SOGA3Q5TF21 947 aa20.44■□□□□ 0.86
SCAMP2-210ENST00000569124 STYK1Q6J9G0 422 aa20.44■□□□□ 0.86
SCAMP2-210ENST00000569124 DZIP3Q86Y13 1208 aaKnown RBP20.44■□□□□ 0.86
SCAMP2-210ENST00000569124 POTECB2RU33 542 aa20.42■□□□□ 0.86
SCAMP2-210ENST00000569124 PRPF40BQ6NWY9 871 aaKnown RBP20.42■□□□□ 0.86
SCAMP2-210ENST00000569124 KCNQ3O43525 872 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 SRGNP10124 158 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 MASTLQ96GX5 879 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
SCAMP2-210ENST00000569124 HSPA1AP0DMV8 641 aaKnown RBP20.4■□□□□ 0.86
SCAMP2-210ENST00000569124 HSPA1BP0DMV9 641 aaKnown RBP20.4■□□□□ 0.86
SCAMP2-210ENST00000569124 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
SCAMP2-210ENST00000569124 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
SCAMP2-210ENST00000569124 PHACTR3Q96KR7 559 aa20.4■□□□□ 0.86
SCAMP2-210ENST00000569124 PIP4K2AP48426 406 aaPredicted RBP20.39■□□□□ 0.85
SCAMP2-210ENST00000569124 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
SCAMP2-210ENST00000569124 CHADLQ6NUI6 762 aa20.38■□□□□ 0.85
SCAMP2-210ENST00000569124 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
SCAMP2-210ENST00000569124 USP16Q9Y5T5 823 aa20.38■□□□□ 0.85
SCAMP2-210ENST00000569124 ADAMTSL1Q8N6G6 1762 aa20.37■□□□□ 0.85
SCAMP2-210ENST00000569124 CAPN15O75808 1086 aa20.37■□□□□ 0.85
SCAMP2-210ENST00000569124 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
SCAMP2-210ENST00000569124 CCDC93Q567U6 631 aa20.37■□□□□ 0.85
SCAMP2-210ENST00000569124 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
SCAMP2-210ENST00000569124 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 NPR1P16066 1061 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 MCM10Q7L590 875 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 CREBZFQ9NS37 354 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 TRPM7Q96QT4 1865 aa20.35■□□□□ 0.85
SCAMP2-210ENST00000569124 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
SCAMP2-210ENST00000569124 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
SCAMP2-210ENST00000569124 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
SCAMP2-210ENST00000569124 PNISRQ8TF01 805 aaKnown RBP20.33■□□□□ 0.85
SCAMP2-210ENST00000569124 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
SCAMP2-210ENST00000569124 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 RGL2O15211 777 aa20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 TPTE2Q6XPS3 522 aa20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 L3MBTL3Q96JM7 780 aaPredicted RBP20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 PNNQ9H307 717 aaKnown RBP20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 MKRN1Q9UHC7 482 aaKnown RBP20.32■□□□□ 0.84
SCAMP2-210ENST00000569124 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAMP2-210ENST00000569124 LDHDQ86WU2 507 aa20.31■□□□□ 0.84
SCAMP2-210ENST00000569124 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
SCAMP2-210ENST00000569124 FAM177BA6PVY3 158 aa20.3■□□□□ 0.84
SCAMP2-210ENST00000569124 NEFMP07197 916 aa20.3■□□□□ 0.84
SCAMP2-210ENST00000569124 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
SCAMP2-210ENST00000569124 LAMB2P55268 1798 aa20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 NBPF26B4DH59 902 aa20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 NBPF10Q6P3W6 841 aaKnown RBP20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 NBPF15Q8N660 670 aa20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
SCAMP2-210ENST00000569124 ZNF541Q9H0D2 1346 aa20.28■□□□□ 0.84
SCAMP2-210ENST00000569124 KLRG2A4D1S0 409 aaPredicted RBP20.28■□□□□ 0.84
SCAMP2-210ENST00000569124 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
SCAMP2-210ENST00000569124 ZNF277Q9NRM2 450 aaPredicted RBP20.28■□□□□ 0.84
SCAMP2-210ENST00000569124 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
SCAMP2-210ENST00000569124 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
SCAMP2-210ENST00000569124 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.84
SCAMP2-210ENST00000569124 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
SCAMP2-210ENST00000569124 TAF7Q15545 349 aaPredicted RBP20.26■□□□□ 0.83
SCAMP2-210ENST00000569124 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
SCAMP2-210ENST00000569124 LTBP1Q14766 1721 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 IARSP41252 1262 aaKnown RBP20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 HLFQ16534 295 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 NYXQ9GZU5 481 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
SCAMP2-210ENST00000569124 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
SCAMP2-210ENST00000569124 SNED1Q8TER0 1413 aa20.24■□□□□ 0.83
SCAMP2-210ENST00000569124 TMEM88BA6NKF7 163 aa20.23■□□□□ 0.83
SCAMP2-210ENST00000569124 EPHX2P34913 555 aa20.23■□□□□ 0.83
SCAMP2-210ENST00000569124 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms