RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 NPHP1O15259 732 aa20.05■□□□□ 0.8
USB1-214ENST00000568848 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
USB1-214ENST00000568848 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
USB1-214ENST00000568848 DZIP3Q86Y13 1208 aaKnown RBP20.04■□□□□ 0.8
USB1-214ENST00000568848 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
USB1-214ENST00000568848 SETDB2Q96T68 719 aa20.04■□□□□ 0.8
USB1-214ENST00000568848 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 SRGNP10124 158 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
USB1-214ENST00000568848 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
USB1-214ENST00000568848 MCM10Q7L590 875 aa20.02■□□□□ 0.8
USB1-214ENST00000568848 GAS2L2Q8NHY3 880 aa20.02■□□□□ 0.8
USB1-214ENST00000568848 ZNF277Q9NRM2 450 aaPredicted RBP20.02■□□□□ 0.8
USB1-214ENST00000568848 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
USB1-214ENST00000568848 FOXN1O15353 648 aa20■□□□□ 0.79
USB1-214ENST00000568848 ST5P78524 1137 aa20■□□□□ 0.79
USB1-214ENST00000568848 STYK1Q6J9G0 422 aa20■□□□□ 0.79
USB1-214ENST00000568848 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
USB1-214ENST00000568848 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
USB1-214ENST00000568848 NBPF5PQ86XG9 351 aaPredicted RBP19.99■□□□□ 0.79
USB1-214ENST00000568848 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 C7orf43Q8WVR3 580 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 CNKSR1Q969H4 720 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 MASTLQ96GX5 879 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
USB1-214ENST00000568848 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
USB1-214ENST00000568848 CREBZFQ9NS37 354 aa19.98■□□□□ 0.79
USB1-214ENST00000568848 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
USB1-214ENST00000568848 HLFQ16534 295 aa19.97■□□□□ 0.79
USB1-214ENST00000568848 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
USB1-214ENST00000568848 TAF1DQ9H5J8 278 aaPredicted RBP19.97■□□□□ 0.79
USB1-214ENST00000568848 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
USB1-214ENST00000568848 COL4A5P29400 1685 aa19.96■□□□□ 0.79
USB1-214ENST00000568848 CNTNAP1P78357 1384 aa19.95■□□□□ 0.79
USB1-214ENST00000568848 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.78
USB1-214ENST00000568848 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
USB1-214ENST00000568848 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
USB1-214ENST00000568848 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
USB1-214ENST00000568848 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
USB1-214ENST00000568848 ABCC12Q96J65 1359 aa19.95■□□□□ 0.78
USB1-214ENST00000568848 VEGFBP49765 207 aa19.94■□□□□ 0.78
USB1-214ENST00000568848 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
USB1-214ENST00000568848 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
USB1-214ENST00000568848 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
USB1-214ENST00000568848 CLEC11AQ9Y240 323 aa19.93■□□□□ 0.78
USB1-214ENST00000568848 ITGBL1O95965 494 aaPredicted RBP19.92■□□□□ 0.78
USB1-214ENST00000568848 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
USB1-214ENST00000568848 LDHDQ86WU2 507 aa19.92■□□□□ 0.78
USB1-214ENST00000568848 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
USB1-214ENST00000568848 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
USB1-214ENST00000568848 SCN4AP35499 1836 aa19.92■□□□□ 0.78
USB1-214ENST00000568848 LTBP1Q14766 1721 aa19.91■□□□□ 0.78
USB1-214ENST00000568848 U2AF1L5P0DN76 240 aaPredicted RBP19.91■□□□□ 0.78
USB1-214ENST00000568848 NPR1P16066 1061 aa19.91■□□□□ 0.78
USB1-214ENST00000568848 U2AF1Q01081 240 aaKnown RBP eCLIP19.91■□□□□ 0.78
USB1-214ENST00000568848 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
USB1-214ENST00000568848 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
USB1-214ENST00000568848 SYNE4Q8N205 404 aa19.9■□□□□ 0.78
USB1-214ENST00000568848 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
USB1-214ENST00000568848 EPHX2P34913 555 aa19.89■□□□□ 0.77
USB1-214ENST00000568848 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
USB1-214ENST00000568848 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
USB1-214ENST00000568848 IQCA1LA6NCM1 817 aa19.88■□□□□ 0.77
USB1-214ENST00000568848 IARSP41252 1262 aaKnown RBP19.88■□□□□ 0.77
USB1-214ENST00000568848 SOGA3Q5TF21 947 aa19.88■□□□□ 0.77
USB1-214ENST00000568848 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
USB1-214ENST00000568848 KLRG2A4D1S0 409 aaPredicted RBP19.87■□□□□ 0.77
USB1-214ENST00000568848 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 GPTP24298 496 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 LBX1P52954 281 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 TTLL7Q6ZT98 887 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 C3orf67Q6ZVT6 689 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
USB1-214ENST00000568848 ZNF652Q9Y2D9 606 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 GJA3Q9Y6H8 435 aa19.87■□□□□ 0.77
USB1-214ENST00000568848 LAMB4A4D0S4 1761 aa19.86■□□□□ 0.77
USB1-214ENST00000568848 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
USB1-214ENST00000568848 CLEC4GQ6UXB4 293 aa19.86■□□□□ 0.77
USB1-214ENST00000568848 TPTE2Q6XPS3 522 aa19.86■□□□□ 0.77
USB1-214ENST00000568848 RTF1Q92541 710 aaKnown RBP19.86■□□□□ 0.77
USB1-214ENST00000568848 CNTROBQ8N137 903 aa19.85■□□□□ 0.77
USB1-214ENST00000568848 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
USB1-214ENST00000568848 NUP98P52948 1817 aa19.84■□□□□ 0.77
USB1-214ENST00000568848 FZD9O00144 591 aa19.84■□□□□ 0.77
USB1-214ENST00000568848 GTF2E1P29083 439 aaPredicted RBP19.84■□□□□ 0.77
USB1-214ENST00000568848 GRM1Q13255 1194 aa19.84■□□□□ 0.77
USB1-214ENST00000568848 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
USB1-214ENST00000568848 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
USB1-214ENST00000568848 UBN2Q6ZU65 1347 aa19.83■□□□□ 0.77
USB1-214ENST00000568848 MYL6BP14649 208 aa19.83■□□□□ 0.77
USB1-214ENST00000568848 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
USB1-214ENST00000568848 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.77
USB1-214ENST00000568848 TRAF5O00463 557 aa19.82■□□□□ 0.76
USB1-214ENST00000568848 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
USB1-214ENST00000568848 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
USB1-214ENST00000568848 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms