RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TEAD4Q15561 434 aa10.21□□□□□ -0.77
HERPUD1-214ENST00000568651 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
HERPUD1-214ENST00000568651 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.77
HERPUD1-214ENST00000568651 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.78
HERPUD1-214ENST00000568651 KIF27Q86VH2 1401 aa10.21□□□□□ -0.78
HERPUD1-214ENST00000568651 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 FGD1P98174 961 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 COX20Q5RI15 118 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 ZNF598Q86UK7 904 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 TEX14Q8IWB6 1497 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 SAP130Q9H0E3 1048 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 QTRT2Q9H974 415 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 WASF2Q9Y6W5 498 aa10.2□□□□□ -0.78
HERPUD1-214ENST00000568651 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
HERPUD1-214ENST00000568651 KDF1Q8NAX2 398 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-214ENST00000568651 SNIP1Q8TAD8 396 aaKnown RBP10.19□□□□□ -0.78
HERPUD1-214ENST00000568651 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-214ENST00000568651 BRPF3Q9ULD4 1205 aa10.19□□□□□ -0.78
HERPUD1-214ENST00000568651 SERTM1A2A2V5 107 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 EML1O00423 815 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 PTGIRP43119 386 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 EIF1AXP47813 144 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 ZNF697Q5TEC3 545 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 TMC7Q7Z402 723 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 DMRTB1Q96MA1 342 aa10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
HERPUD1-214ENST00000568651 UHRF1BP1LA0JNW5 1464 aa10.17□□□□□ -0.78
HERPUD1-214ENST00000568651 TREHO43280 583 aa10.17□□□□□ -0.78
HERPUD1-214ENST00000568651 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
HERPUD1-214ENST00000568651 CUL7Q14999 1698 aa10.17□□□□□ -0.78
HERPUD1-214ENST00000568651 BRD2P25440 801 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 CENPCQ03188 943 aa10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 RTN1Q16799 776 aa10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 PKD2L1Q9P0L9 805 aa10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
HERPUD1-214ENST00000568651 FZD6O60353 706 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 GPC1P35052 558 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 NOS2P35228 1153 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 ALKBH8Q96BT7 664 aaKnown RBP10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 FAM129BQ96TA1 746 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 KDM5BQ9UGL1 1544 aa10.15□□□□□ -0.78
HERPUD1-214ENST00000568651 DISP1Q96F81 1524 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 ITGAEP38570 1179 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 PRKD2Q9BZL6 878 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 MAP3K4Q9Y6R4 1608 aa10.14□□□□□ -0.79
HERPUD1-214ENST00000568651 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 WDR7Q9Y4E6 1490 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 P4HBP07237 508 aaKnown RBP10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 USP5P45974 858 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 CBLBQ13191 982 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 DSC3Q14574 896 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 ZDHHC1Q8WTX9 485 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 ITPKCQ96DU7 683 aa10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
HERPUD1-214ENST00000568651 IGHA2P01877 340 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 TCF3P15923 654 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 C11orf91Q3C1V1 193 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 ALDH16A1Q8IZ83 802 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 IQGAP2Q13576 1575 aa10.12□□□□□ -0.79
HERPUD1-214ENST00000568651 ARID4BQ4LE39 1312 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 TIMP2P16035 220 aa10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 ZSCAN10Q96SZ4 725 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 ZNF232Q9UNY5 417 aa10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 ZCCHC11Q5TAX3 1644 aaKnown RBP10.11□□□□□ -0.79
HERPUD1-214ENST00000568651 A0A0G2JS52 829 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 MEN1O00255 615 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 MZF1P28698 734 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 HSPA2P54652 639 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 AAMPQ13685 434 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 HIF1AQ16665 826 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 ILDR2Q71H61 639 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 GJD3Q8N144 294 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 MEIOBQ8N635 442 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 GPC6Q9Y625 555 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 PTPRMP28827 1452 aa10.1□□□□□ -0.79
HERPUD1-214ENST00000568651 KIF21BO75037 1637 aa10.09□□□□□ -0.79
HERPUD1-214ENST00000568651 RAPGEF3O95398 923 aa10.09□□□□□ -0.79
HERPUD1-214ENST00000568651 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
HERPUD1-214ENST00000568651 FOXC1Q12948 553 aa10.09□□□□□ -0.79
HERPUD1-214ENST00000568651 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
HERPUD1-214ENST00000568651 EHHADHQ08426 723 aa10.08□□□□□ -0.8
HERPUD1-214ENST00000568651 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
HERPUD1-214ENST00000568651 CYP4X1Q8N118 509 aa10.08□□□□□ -0.8
HERPUD1-214ENST00000568651 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms