RNA–Protein interactions for RNA: ENST00000568228.5

CMC2-219, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-219ENST00000568228 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
CMC2-219ENST00000568228 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
CMC2-219ENST00000568228 SCN4AP35499 1836 aa16.06■□□□□ 0.16
CMC2-219ENST00000568228 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
CMC2-219ENST00000568228 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
CMC2-219ENST00000568228 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
CMC2-219ENST00000568228 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
CMC2-219ENST00000568228 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
CMC2-219ENST00000568228 SOGA3Q5TF21 947 aa16.05■□□□□ 0.16
CMC2-219ENST00000568228 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
CMC2-219ENST00000568228 BTBD11A6QL63 1104 aa16.04■□□□□ 0.16
CMC2-219ENST00000568228 SRGNP10124 158 aa16.04■□□□□ 0.16
CMC2-219ENST00000568228 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
CMC2-219ENST00000568228 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
CMC2-219ENST00000568228 IQCA1LA6NCM1 817 aa16.03■□□□□ 0.16
CMC2-219ENST00000568228 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
CMC2-219ENST00000568228 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
CMC2-219ENST00000568228 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
CMC2-219ENST00000568228 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
CMC2-219ENST00000568228 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
CMC2-219ENST00000568228 KCNQ3O43525 872 aa16.01■□□□□ 0.15
CMC2-219ENST00000568228 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
CMC2-219ENST00000568228 EAPPQ56P03 285 aaPredicted RBP16.01■□□□□ 0.15
CMC2-219ENST00000568228 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
CMC2-219ENST00000568228 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
CMC2-219ENST00000568228 CNTNAP1P78357 1384 aa16■□□□□ 0.15
CMC2-219ENST00000568228 USP16Q9Y5T5 823 aa16■□□□□ 0.15
CMC2-219ENST00000568228 FOXN1O15353 648 aa15.99■□□□□ 0.15
CMC2-219ENST00000568228 NPR1P16066 1061 aa15.99■□□□□ 0.15
CMC2-219ENST00000568228 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
CMC2-219ENST00000568228 TAF1DQ9H5J8 278 aaPredicted RBP15.99■□□□□ 0.15
CMC2-219ENST00000568228 PASKQ96RG2 1323 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 FAM177BA6PVY3 158 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
CMC2-219ENST00000568228 AIDAQ96BJ3 306 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
CMC2-219ENST00000568228 PHACTR3Q96KR7 559 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 ZNF277Q9NRM2 450 aaPredicted RBP15.98■□□□□ 0.15
CMC2-219ENST00000568228 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
CMC2-219ENST00000568228 ZNF541Q9H0D2 1346 aa15.97■□□□□ 0.15
CMC2-219ENST00000568228 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
CMC2-219ENST00000568228 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
CMC2-219ENST00000568228 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
CMC2-219ENST00000568228 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
CMC2-219ENST00000568228 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
CMC2-219ENST00000568228 TMEM88BA6NKF7 163 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 SNRPA1P09661 255 aaKnown RBP15.96■□□□□ 0.15
CMC2-219ENST00000568228 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
CMC2-219ENST00000568228 RNF123Q5XPI4 1314 aa15.95■□□□□ 0.14
CMC2-219ENST00000568228 EPHX2P34913 555 aa15.95■□□□□ 0.14
CMC2-219ENST00000568228 VEGFBP49765 207 aa15.95■□□□□ 0.14
CMC2-219ENST00000568228 MCM10Q7L590 875 aa15.95■□□□□ 0.14
CMC2-219ENST00000568228 GTF2E1P29083 439 aaPredicted RBP15.94■□□□□ 0.14
CMC2-219ENST00000568228 CTCFP49711 727 aaPredicted RBP15.94■□□□□ 0.14
CMC2-219ENST00000568228 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
CMC2-219ENST00000568228 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
CMC2-219ENST00000568228 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
CMC2-219ENST00000568228 PRDM10Q9NQV6 1147 aa15.93■□□□□ 0.14
CMC2-219ENST00000568228 NUP98P52948 1817 aa15.92■□□□□ 0.14
CMC2-219ENST00000568228 KLRG2A4D1S0 409 aaPredicted RBP15.92■□□□□ 0.14
CMC2-219ENST00000568228 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
CMC2-219ENST00000568228 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
CMC2-219ENST00000568228 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
CMC2-219ENST00000568228 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
CMC2-219ENST00000568228 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
CMC2-219ENST00000568228 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
CMC2-219ENST00000568228 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
CMC2-219ENST00000568228 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
CMC2-219ENST00000568228 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■□□ 16.8
CMC2-219ENST00000568228 DCTN1Q14203 1278 aa15.91■□□□□ 0.14
CMC2-219ENST00000568228 HLFQ16534 295 aa15.91■□□□□ 0.14
CMC2-219ENST00000568228 CNTROBQ8N137 903 aa15.91■□□□□ 0.14
CMC2-219ENST00000568228 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
CMC2-219ENST00000568228 FZD9O00144 591 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 LBX1P52954 281 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 GPC2Q8N158 579 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 ABT1Q9ULW3 272 aaKnown RBP15.9■□□□□ 0.14
CMC2-219ENST00000568228 GJA3Q9Y6H8 435 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
CMC2-219ENST00000568228 LTBP1Q14766 1721 aa15.89■□□□□ 0.13
CMC2-219ENST00000568228 RGL2O15211 777 aa15.89■□□□□ 0.13
CMC2-219ENST00000568228 DEFB115Q30KQ5 88 aa15.89■□□□□ 0.13
CMC2-219ENST00000568228 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
CMC2-219ENST00000568228 KDM3BQ7LBC6 1761 aa15.89■□□□□ 0.13
CMC2-219ENST00000568228 ABCC12Q96J65 1359 aa15.88■□□□□ 0.13
CMC2-219ENST00000568228 RASSF10A6NK89 507 aa15.88■□□□□ 0.13
CMC2-219ENST00000568228 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
CMC2-219ENST00000568228 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
CMC2-219ENST00000568228 NUTM1Q86Y26 1132 aa15.88■□□□□ 0.13
CMC2-219ENST00000568228 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
CMC2-219ENST00000568228 WBP1LQ9NX94 342 aa15.88■□□□□ 0.13
CMC2-219ENST00000568228 COL4A5P29400 1685 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms