RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 TNS4Q8IZW8 715 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
PTPN9-205ENST00000568108 HEG1Q9ULI3 1381 aa8.5□□□□□ -1.05
PTPN9-205ENST00000568108 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
PTPN9-205ENST00000568108 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
PTPN9-205ENST00000568108 FMNL2Q96PY5 1086 aa8.5□□□□□ -1.05
PTPN9-205ENST00000568108 BTBD11A6QL63 1104 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 KCNQ3O43525 872 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 CAMTA2O94983 1202 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 HSPA1AP0DMV8 641 aaKnown RBP8.49□□□□□ -1.05
PTPN9-205ENST00000568108 HSPA1BP0DMV9 641 aaKnown RBP8.49□□□□□ -1.05
PTPN9-205ENST00000568108 ST5P78524 1137 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 STYK1Q6J9G0 422 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 TAOK3Q9H2K8 898 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 CCDC88AQ3V6T2 1871 aa8.49□□□□□ -1.05
PTPN9-205ENST00000568108 ANP32CO43423 234 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 DDNO94850 711 aaPredicted RBP8.48□□□□□ -1.05
PTPN9-205ENST00000568108 SRGNP10124 158 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 SOGA3Q5TF21 947 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 CHADLQ6NUI6 762 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
PTPN9-205ENST00000568108 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
PTPN9-205ENST00000568108 MASTLQ96GX5 879 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 USP16Q9Y5T5 823 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 LTBP3Q9NS15 1303 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
PTPN9-205ENST00000568108 CCER2I3L3R5 266 aa8.47□□□□□ -1.05
PTPN9-205ENST00000568108 PIP4K2AP48426 406 aaPredicted RBP8.47□□□□□ -1.05
PTPN9-205ENST00000568108 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
PTPN9-205ENST00000568108 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
PTPN9-205ENST00000568108 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
PTPN9-205ENST00000568108 UBR2Q8IWV8 1755 aa8.47□□□□□ -1.05
PTPN9-205ENST00000568108 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
PTPN9-205ENST00000568108 SNRPA1P09661 255 aaKnown RBP8.46□□□□□ -1.06
PTPN9-205ENST00000568108 POTEIP0CG38 1075 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 POTEJP0CG39 1038 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 PRKAR2BP31323 418 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 C1QBPQ07021 282 aaKnown RBP8.46□□□□□ -1.06
PTPN9-205ENST00000568108 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 NBPF5PQ86XG9 351 aaPredicted RBP8.46□□□□□ -1.06
PTPN9-205ENST00000568108 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 CFAP53Q96M91 514 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 ANKRD31Q8N7Z5 1873 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 NPC1L1Q9UHC9 1359 aa8.46□□□□□ -1.06
PTPN9-205ENST00000568108 PRAMEF22A3QJZ6 481 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 IQCA1LA6NCM1 817 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 NPR1P16066 1061 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
PTPN9-205ENST00000568108 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 RTF1Q92541 710 aaKnown RBP8.45□□□□□ -1.06
PTPN9-205ENST00000568108 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 NUDCQ9Y266 331 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 FER1L6Q2WGJ9 1857 aa8.45□□□□□ -1.06
PTPN9-205ENST00000568108 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
PTPN9-205ENST00000568108 FAM177BA6PVY3 158 aa8.44□□□□□ -1.06
PTPN9-205ENST00000568108 U2AF1L5P0DN76 240 aaPredicted RBP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 MCM10Q7L590 875 aa8.44□□□□□ -1.06
PTPN9-205ENST00000568108 LDHDQ86WU2 507 aa8.44□□□□□ -1.06
PTPN9-205ENST00000568108 TAF1DQ9H5J8 278 aaPredicted RBP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 ZNF277Q9NRM2 450 aaPredicted RBP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 NIP7Q9Y221 180 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
PTPN9-205ENST00000568108 SLX4Q8IY92 1834 aa8.44□□□□□ -1.06
PTPN9-205ENST00000568108 DICER1Q9UPY3 1922 aaKnown RBP8.44□□□□□ -1.06
PTPN9-205ENST00000568108 PCNTO95613 3336 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 KLRG2A4D1S0 409 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 DCTN1Q14203 1278 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 RTKN2Q8IZC4 609 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 L3MBTL3Q96JM7 780 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 CLEC11AQ9Y240 323 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
PTPN9-205ENST00000568108 COL11A2P13942 1736 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-205ENST00000568108 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 RGL2O15211 777 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 HTATSF1O43719 755 aaKnown RBP8.42□□□□□ -1.06
PTPN9-205ENST00000568108 ITGBL1O95965 494 aaPredicted RBP8.42□□□□□ -1.06
PTPN9-205ENST00000568108 ALDH1B1P30837 517 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
PTPN9-205ENST00000568108 HLFQ16534 295 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 OLFM4Q6UX06 510 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 SYNE4Q8N205 404 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 MIS18AQ9NYP9 233 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 HACL1Q9UJ83 578 aa8.42□□□□□ -1.06
PTPN9-205ENST00000568108 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms