RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 WASF2Q9Y6W5 498 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 FMN2Q9NZ56 1722 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 DCCP43146 1447 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 SIAH2O43255 324 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
SMG1-214ENST00000568038 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
SMG1-214ENST00000568038 ZNF511Q8NB15 262 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 SLAIN2Q9P270 581 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 MST1RQ04912 1400 aa10.66□□□□□ -0.7
SMG1-214ENST00000568038 LILRB3O75022 631 aa10.65□□□□□ -0.7
SMG1-214ENST00000568038 DDX10Q13206 875 aaKnown RBP10.65□□□□□ -0.7
SMG1-214ENST00000568038 ATP7BP35670 1465 aa10.65□□□□□ -0.7
SMG1-214ENST00000568038 C1orf167Q5SNV9 1468 aa10.65□□□□□ -0.7
SMG1-214ENST00000568038 PPIP5K1Q6PFW1 1433 aa10.65□□□□□ -0.7
SMG1-214ENST00000568038 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.7
SMG1-214ENST00000568038 RGPD8O14715 1765 aaPredicted RBP10.65□□□□□ -0.71
SMG1-214ENST00000568038 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
SMG1-214ENST00000568038 TOM1O60784 492 aa10.64□□□□□ -0.71
SMG1-214ENST00000568038 NGDNQ8NEJ9 315 aaKnown RBP10.64□□□□□ -0.71
SMG1-214ENST00000568038 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
SMG1-214ENST00000568038 USP32Q8NFA0 1604 aa10.64□□□□□ -0.71
SMG1-214ENST00000568038 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
SMG1-214ENST00000568038 PANK3Q9H999 370 aa10.63□□□□□ -0.71
SMG1-214ENST00000568038 TLL2Q9Y6L7 1015 aa10.63□□□□□ -0.71
SMG1-214ENST00000568038 ACEP12821 1306 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 FOXO3O43524 673 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 BRINP3Q76B58 766 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
SMG1-214ENST00000568038 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 FAM117AQ9C073 453 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 ATP13A2Q9NQ11 1180 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
SMG1-214ENST00000568038 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
SMG1-214ENST00000568038 VARSP26640 1264 aaKnown RBP10.61□□□□□ -0.71
SMG1-214ENST00000568038 AGERQ15109 404 aa10.61□□□□□ -0.71
SMG1-214ENST00000568038 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
SMG1-214ENST00000568038 DDX17Q92841 729 aaKnown RBP10.61□□□□□ -0.71
SMG1-214ENST00000568038 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
SMG1-214ENST00000568038 IQSEC2Q5JU85 1478 aa10.61□□□□□ -0.71
SMG1-214ENST00000568038 MYOM1P52179 1685 aa10.6□□□□□ -0.71
SMG1-214ENST00000568038 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
SMG1-214ENST00000568038 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
SMG1-214ENST00000568038 PSME1Q06323 249 aa10.6□□□□□ -0.71
SMG1-214ENST00000568038 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
SMG1-214ENST00000568038 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
SMG1-214ENST00000568038 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
SMG1-214ENST00000568038 A0A1W2PP64 1363 aa10.59□□□□□ -0.71
SMG1-214ENST00000568038 KTN1Q86UP2 1357 aaKnown RBP10.59□□□□□ -0.71
SMG1-214ENST00000568038 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
SMG1-214ENST00000568038 CD163L1Q9NR16 1453 aa10.59□□□□□ -0.71
SMG1-214ENST00000568038 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
SMG1-214ENST00000568038 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
SMG1-214ENST00000568038 CNGB1Q14028 1251 aaPredicted RBP10.58□□□□□ -0.72
SMG1-214ENST00000568038 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
SMG1-214ENST00000568038 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
SMG1-214ENST00000568038 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
SMG1-214ENST00000568038 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
SMG1-214ENST00000568038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMG1-214ENST00000568038 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
SMG1-214ENST00000568038 KNSTRNQ9Y448 316 aa10.57□□□□□ -0.72
SMG1-214ENST00000568038 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
SMG1-214ENST00000568038 NPHP3Q7Z494 1330 aa10.57□□□□□ -0.72
SMG1-214ENST00000568038 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
SMG1-214ENST00000568038 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
SMG1-214ENST00000568038 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
SMG1-214ENST00000568038 USP6P35125 1406 aa10.56□□□□□ -0.72
SMG1-214ENST00000568038 ROBO1Q9Y6N7 1651 aa10.56□□□□□ -0.72
SMG1-214ENST00000568038 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
SMG1-214ENST00000568038 TTC21BQ7Z4L5 1316 aa10.55□□□□□ -0.72
SMG1-214ENST00000568038 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
SMG1-214ENST00000568038 BMP1P13497 986 aa10.54□□□□□ -0.72
SMG1-214ENST00000568038 EDC4Q6P2E9 1401 aaKnown RBP10.54□□□□□ -0.72
SMG1-214ENST00000568038 NME9Q86XW9 330 aa10.54□□□□□ -0.72
SMG1-214ENST00000568038 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
SMG1-214ENST00000568038 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
SMG1-214ENST00000568038 NNTQ13423 1086 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 SH3D19Q5HYK7 790 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
SMG1-214ENST00000568038 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
SMG1-214ENST00000568038 ARMC2Q8NEN0 867 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 GGNBP2Q9H3C7 697 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
SMG1-214ENST00000568038 MON2Q7Z3U7 1717 aa10.53□□□□□ -0.72
SMG1-214ENST00000568038 FYB1O15117 783 aa10.52□□□□□ -0.73
SMG1-214ENST00000568038 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
SMG1-214ENST00000568038 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
SMG1-214ENST00000568038 ABTB2Q8N961 1025 aa10.52□□□□□ -0.73
SMG1-214ENST00000568038 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
SMG1-214ENST00000568038 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
SMG1-214ENST00000568038 SSH2Q76I76 1423 aa10.51□□□□□ -0.73
SMG1-214ENST00000568038 PXDNQ92626 1479 aa10.51□□□□□ -0.73
SMG1-214ENST00000568038 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
SMG1-214ENST00000568038 TRIM47Q96LD4 638 aa10.51□□□□□ -0.73
SMG1-214ENST00000568038 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
SMG1-214ENST00000568038 SBNO1A3KN83 1393 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms