RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CAPN2P17655 700 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ANAPC15P60006 121 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ARHGAP45Q92619 1136 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ATP10BO94823 1461 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 GAS2L3Q86XJ1 694 aa14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P13-202ENST00000567704 IL16Q14005 1332 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 TAF7Q15545 349 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 FAM83GA6ND36 823 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 IVLP07476 585 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 TICAM2Q86XR7 235 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 ANKRD44Q8N8A2 993 aa14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 IMMTQ16891 758 aaKnown RBP14.38□□□□□ -0.11
CSPG4P13-202ENST00000567704 PRM3Q9NNZ6 103 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 ECHDC1Q9NTX5 307 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 UBASH3AP57075 661 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 SYT10Q6XYQ8 523 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 PTPRCP08575 1304 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 ENOX2Q16206 610 aaKnown RBP14.37□□□□□ -0.11
CSPG4P13-202ENST00000567704 NEFHP12036 1026 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 DNA2P51530 1060 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 SPA17Q15506 151 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 HSP90AA4PQ58FG1 418 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 TAF4BQ92750 862 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 FLIIQ13045 1269 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 RBM33Q96EV2 1170 aaKnown RBP14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 LMBRD1Q9NUN5 540 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 MICALCLQ6ZW33 695 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 CHD1O14646 1710 aa14.36□□□□□ -0.11
CSPG4P13-202ENST00000567704 SYTL4Q96C24 671 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 RASSF4Q9H2L5 321 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 CAMSAP2Q08AD1 1489 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 CEP126Q9P2H0 1117 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 ABCC2Q92887 1545 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 KRT18P05783 430 aaKnown RBP14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 SYT1P21579 422 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 PHACTR2O75167 634 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 INTS4Q96HW7 963 aaKnown RBP14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P13-202ENST00000567704 RALGAPBQ86X10 1494 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 PAFAH1B1P43034 410 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 GABPB1Q06547 395 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 MICALL1Q8N3F8 863 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 SRRTQ9BXP5 876 aaKnown RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 TMEM63CQ9P1W3 806 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 TCEAL9Q9UHQ7 104 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 EVA1CP58658 441 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 WASF1Q92558 559 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 BCCIPQ9P287 314 aaKnown RBP eCLIP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 NEK1Q96PY6 1258 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
CSPG4P13-202ENST00000567704 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.11
CSPG4P13-202ENST00000567704 NME9Q86XW9 330 aa14.33□□□□□ -0.11
CSPG4P13-202ENST00000567704 VPS18Q9P253 973 aa14.33□□□□□ -0.11
CSPG4P13-202ENST00000567704 CEP131Q9UPN4 1083 aa14.33□□□□□ -0.11
CSPG4P13-202ENST00000567704 YEATS4O95619 227 aa14.33□□□□□ -0.12
CSPG4P13-202ENST00000567704 AK2P54819 239 aa14.33□□□□□ -0.12
CSPG4P13-202ENST00000567704 BRF1Q92994 677 aa14.33□□□□□ -0.12
CSPG4P13-202ENST00000567704 ERO1AQ96HE7 468 aa14.33□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC43Q96MW1 224 aaKnown RBP14.33□□□□□ -0.12
CSPG4P13-202ENST00000567704 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 NPHP3Q7Z494 1330 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 GOLGA8BA8MQT2 603 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 TTC31Q49AM3 519 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 RHPN1Q8TCX5 695 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC113Q9H0I3 377 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 TESK2Q96S53 571 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms