RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
CDH13-210ENST00000567445 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
CDH13-210ENST00000567445 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
CDH13-210ENST00000567445 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
CDH13-210ENST00000567445 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
CDH13-210ENST00000567445 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
CDH13-210ENST00000567445 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
CDH13-210ENST00000567445 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
CDH13-210ENST00000567445 SLC39A6Q13433 755 aa12.38□□□□□ -0.43
CDH13-210ENST00000567445 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
CDH13-210ENST00000567445 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
CDH13-210ENST00000567445 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
CDH13-210ENST00000567445 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
CDH13-210ENST00000567445 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
CDH13-210ENST00000567445 COL3A1P02461 1466 aaPredicted RBP12.37□□□□□ -0.43
CDH13-210ENST00000567445 DPEP1P16444 411 aa12.37□□□□□ -0.43
CDH13-210ENST00000567445 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
CDH13-210ENST00000567445 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
CDH13-210ENST00000567445 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
CDH13-210ENST00000567445 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CDH13-210ENST00000567445 ZPR1O75312 459 aa12.36□□□□□ -0.43
CDH13-210ENST00000567445 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
CDH13-210ENST00000567445 DDR1Q08345 913 aa12.36□□□□□ -0.43
CDH13-210ENST00000567445 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
CDH13-210ENST00000567445 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
CDH13-210ENST00000567445 ZNF526Q8TF50 670 aaPredicted RBP12.36□□□□□ -0.43
CDH13-210ENST00000567445 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
CDH13-210ENST00000567445 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
CDH13-210ENST00000567445 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
CDH13-210ENST00000567445 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
CDH13-210ENST00000567445 FCHSD2O94868 740 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 KCNA3P22001 575 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 TM4SF1P30408 202 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
CDH13-210ENST00000567445 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 COL15A1P39059 1388 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 G3V3G9 751 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 NARFQ9UHQ1 456 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
CDH13-210ENST00000567445 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
CDH13-210ENST00000567445 TEFQ10587 303 aa12.33□□□□□ -0.44
CDH13-210ENST00000567445 STARD3NLO95772 234 aa12.32□□□□□ -0.44
CDH13-210ENST00000567445 DALRD3Q5D0E6 543 aaKnown RBP12.32□□□□□ -0.44
CDH13-210ENST00000567445 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
CDH13-210ENST00000567445 CFAP53Q96M91 514 aa12.32□□□□□ -0.44
CDH13-210ENST00000567445 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
CDH13-210ENST00000567445 ARFGEF1Q9Y6D6 1849 aa12.31□□□□□ -0.44
CDH13-210ENST00000567445 NFIXQ14938 502 aa12.31□□□□□ -0.44
CDH13-210ENST00000567445 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
CDH13-210ENST00000567445 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
CDH13-210ENST00000567445 KIF3CO14782 793 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
CDH13-210ENST00000567445 CHRNA5P30532 468 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 PRKAR2BP31323 418 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
CDH13-210ENST00000567445 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
CDH13-210ENST00000567445 SNPHO15079 494 aa12.29□□□□□ -0.44
CDH13-210ENST00000567445 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
CDH13-210ENST00000567445 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
CDH13-210ENST00000567445 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
CDH13-210ENST00000567445 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
CDH13-210ENST00000567445 SIPA1L3O60292 1781 aaPredicted RBP12.29□□□□□ -0.44
CDH13-210ENST00000567445 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
CDH13-210ENST00000567445 A0A087WZG4 1122 aa12.28□□□□□ -0.44
CDH13-210ENST00000567445 SERPINB2P05120 415 aa12.28□□□□□ -0.44
CDH13-210ENST00000567445 HSPA6P17066 643 aa12.28□□□□□ -0.44
CDH13-210ENST00000567445 PPP2R1AP30153 589 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 NBR1Q14596 966 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.44
CDH13-210ENST00000567445 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
CDH13-210ENST00000567445 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDH13-210ENST00000567445 BTBD11A6QL63 1104 aa12.26□□□□□ -0.45
CDH13-210ENST00000567445 IL6STP40189 918 aaPredicted RBP12.26□□□□□ -0.45
CDH13-210ENST00000567445 BICDL1Q6ZP65 573 aa12.26□□□□□ -0.45
CDH13-210ENST00000567445 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
CDH13-210ENST00000567445 RGL2O15211 777 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 KCNQ3O43525 872 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 ST18O60284 1047 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 TOMM70O94826 608 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
CDH13-210ENST00000567445 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
CDH13-210ENST00000567445 H0YIN7 160 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 A1BGP04217 495 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
CDH13-210ENST00000567445 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms