RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 LINC00114Q6XXX2 140 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 ALYREFQ86V81 257 aaKnown RBP7.42□□□□□ -1.22
CDH1-211ENST00000567320 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 TSPAN10Q9H1Z9 355 aaPredicted RBP7.42□□□□□ -1.22
CDH1-211ENST00000567320 NOP53Q9NZM5 478 aaKnown RBP7.42□□□□□ -1.22
CDH1-211ENST00000567320 RASA1P20936 1047 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 PSMA6P60900 246 aaKnown RBP7.41□□□□□ -1.22
CDH1-211ENST00000567320 LAMC2Q13753 1193 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 LARGE2Q8N3Y3 721 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 TSEN2Q8NCE0 465 aaKnown RBP7.41□□□□□ -1.22
CDH1-211ENST00000567320 GLMNQ92990 594 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
CDH1-211ENST00000567320 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
CDH1-211ENST00000567320 SFI1A8K8P3 1242 aa7.4□□□□□ -1.22
CDH1-211ENST00000567320 EML1O00423 815 aa7.4□□□□□ -1.22
CDH1-211ENST00000567320 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
CDH1-211ENST00000567320 ITGB2P05107 769 aa7.4□□□□□ -1.22
CDH1-211ENST00000567320 DGKGP49619 791 aa7.4□□□□□ -1.22
CDH1-211ENST00000567320 PROSER2Q86WR7 435 aaPredicted RBP7.4□□□□□ -1.22
CDH1-211ENST00000567320 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
CDH1-211ENST00000567320 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
CDH1-211ENST00000567320 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
CDH1-211ENST00000567320 EFSO43281 561 aa7.39□□□□□ -1.23
CDH1-211ENST00000567320 PROCP04070 461 aa7.39□□□□□ -1.23
CDH1-211ENST00000567320 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
CDH1-211ENST00000567320 NEUROD1Q13562 356 aa7.39□□□□□ -1.23
CDH1-211ENST00000567320 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
CDH1-211ENST00000567320 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
CDH1-211ENST00000567320 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
CDH1-211ENST00000567320 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
CDH1-211ENST00000567320 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 ELOA3DA6NLF2 546 aaPredicted RBP7.38□□□□□ -1.23
CDH1-211ENST00000567320 SFSWAPQ12872 951 aaKnown RBP7.38□□□□□ -1.23
CDH1-211ENST00000567320 ELOA3BQ3SY89 546 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 ELOA3Q8NG57 546 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 NGLY1Q96IV0 654 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 HSH2DQ96JZ2 352 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 HINFPQ9BQA5 517 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
CDH1-211ENST00000567320 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
CDH1-211ENST00000567320 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
CDH1-211ENST00000567320 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
CDH1-211ENST00000567320 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
CDH1-211ENST00000567320 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
CDH1-211ENST00000567320 BRD7Q9NPI1 651 aa7.37□□□□□ -1.23
CDH1-211ENST00000567320 C1QTNF9BB2RNN3 333 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 ADAM23O75077 832 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 BAG6P46379 1132 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 SEC13P55735 322 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 TBC1D8BQ0IIM8 1120 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 SPEM2Q0P670 501 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 SIX5Q8N196 739 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 SCG3Q8WXD2 468 aaKnown RBP7.36□□□□□ -1.23
CDH1-211ENST00000567320 SLC30A3Q99726 388 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
CDH1-211ENST00000567320 K7ELQ4 463 aaPredicted RBP7.35□□□□□ -1.23
CDH1-211ENST00000567320 M0R2N6 131 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 LGR5O75473 907 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 ALDH16A1Q8IZ83 802 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 IGFLR1Q9H665 355 aa7.35□□□□□ -1.23
CDH1-211ENST00000567320 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
CDH1-211ENST00000567320 ATAD2Q6PL18 1390 aa7.34□□□□□ -1.23
CDH1-211ENST00000567320 SIN3BO75182 1162 aa7.34□□□□□ -1.23
CDH1-211ENST00000567320 FURINP09958 794 aa7.34□□□□□ -1.23
CDH1-211ENST00000567320 CD163Q86VB7 1156 aa7.34□□□□□ -1.23
CDH1-211ENST00000567320 KCNH4Q9UQ05 1017 aa7.34□□□□□ -1.23
CDH1-211ENST00000567320 SPDYE3A6NKU9 549 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 M0R082 166 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 HIRAP54198 1017 aaPredicted RBP7.33□□□□□ -1.24
CDH1-211ENST00000567320 PRRT3Q5FWE3 981 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 BHMTQ93088 406 aa7.33□□□□□ -1.24
CDH1-211ENST00000567320 ZNF587Q96SQ5 575 aaPredicted RBP7.33□□□□□ -1.24
CDH1-211ENST00000567320 CHRNA4P43681 627 aa7.32□□□□□ -1.24
CDH1-211ENST00000567320 FNBP4Q8N3X1 1017 aaPredicted RBP7.32□□□□□ -1.24
CDH1-211ENST00000567320 TRIM11Q96F44 468 aa7.32□□□□□ -1.24
CDH1-211ENST00000567320 PPP1R12CQ9BZL4 782 aa7.32□□□□□ -1.24
CDH1-211ENST00000567320 C21orf2O43822 256 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 SPATA31C1P0DKV0 1188 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
CDH1-211ENST00000567320 ADH7P40394 386 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 TYRO3Q06418 890 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 DPYDQ12882 1025 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 HIF1AQ16665 826 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
CDH1-211ENST00000567320 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
CDH1-211ENST00000567320 APBA3O96018 575 aa7.3□□□□□ -1.24
CDH1-211ENST00000567320 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
CDH1-211ENST00000567320 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
CDH1-211ENST00000567320 GAS2L2Q8NHY3 880 aa7.3□□□□□ -1.24
CDH1-211ENST00000567320 PNMA5Q96PV4 448 aa7.3□□□□□ -1.24
CDH1-211ENST00000567320 C2orf49Q9BVC5 232 aaPredicted RBP7.3□□□□□ -1.24
CDH1-211ENST00000567320 UBE2OQ9C0C9 1292 aaKnown RBP7.3□□□□□ -1.24
CDH1-211ENST00000567320 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms