RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 IL2RBP14784 551 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 OS9Q13438 667 aaPredicted RBP12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 SIL1Q9H173 461 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 PCDH11XQ9BZA7 1347 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 PCDH11YQ9BZA8 1340 aa12.47□□□□□ -0.41
CCNDBP1-210ENST00000566882 A1BGP04217 495 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 CHMLP26374 656 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 ERC2O15083 957 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 MTX1Q13505 466 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 GCKRQ14397 625 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 KIF1BPQ96EK5 621 aa12.46□□□□□ -0.41
CCNDBP1-210ENST00000566882 RAB11FIP3O75154 756 aa12.46□□□□□ -0.42
CCNDBP1-210ENST00000566882 TTLL7Q6ZT98 887 aa12.46□□□□□ -0.42
CCNDBP1-210ENST00000566882 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.42
CCNDBP1-210ENST00000566882 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.42
CCNDBP1-210ENST00000566882 PALD1Q9ULE6 856 aa12.46□□□□□ -0.42
CCNDBP1-210ENST00000566882 DDIT3P35638 169 aa12.45□□□□□ -0.42
CCNDBP1-210ENST00000566882 CASC1Q6TDU7 716 aa12.45□□□□□ -0.42
CCNDBP1-210ENST00000566882 SASH1O94885 1247 aa12.45□□□□□ -0.42
CCNDBP1-210ENST00000566882 UTYO14607 1347 aa12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 TOGARAM1Q9Y4F4 1720 aa12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 K7ELQ4 463 aaPredicted RBP12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
CCNDBP1-210ENST00000566882 AFDNP55196 1824 aaKnown RBP12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 KCPQ6ZWJ8 1503 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 ANO2Q9NQ90 1003 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 ASAP1Q9ULH1 1129 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 KAT6BQ8WYB5 2073 aa12.43□□□□□ -0.42
CCNDBP1-210ENST00000566882 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 REC8O95072 547 aa12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 UBR2Q8IWV8 1755 aa12.42□□□□□ -0.42
CCNDBP1-210ENST00000566882 RABEP1Q15276 862 aa12.41□□□□□ -0.42
CCNDBP1-210ENST00000566882 AACSQ86V21 672 aa12.41□□□□□ -0.42
CCNDBP1-210ENST00000566882 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
CCNDBP1-210ENST00000566882 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
CCNDBP1-210ENST00000566882 A0A087WZG4 1122 aa12.41□□□□□ -0.42
CCNDBP1-210ENST00000566882 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
CCNDBP1-210ENST00000566882 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
CCNDBP1-210ENST00000566882 PIGBQ92521 554 aa12.4□□□□□ -0.42
CCNDBP1-210ENST00000566882 AOX1Q06278 1338 aa12.4□□□□□ -0.42
CCNDBP1-210ENST00000566882 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 PLBD2Q8NHP8 589 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 IFIT2P09913 472 aaKnown RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 MCM4P33991 863 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 RFX5P48382 616 aaPredicted RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 CASP7P55210 303 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 PKP1Q13835 747 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
CCNDBP1-210ENST00000566882 NEK4P51957 841 aa12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 EDC3Q96F86 508 aaKnown RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 USP42Q9H9J4 1324 aaKnown RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 SSFA2P28290 1259 aa12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 COL16A1Q07092 1604 aaPredicted RBP12.38□□□□□ -0.43
CCNDBP1-210ENST00000566882 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 SLC4A9Q96Q91 983 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 CHGBP05060 677 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 TFCP2Q12800 502 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
CCNDBP1-210ENST00000566882 ITGB4P16144 1822 aa12.36□□□□□ -0.43
CCNDBP1-210ENST00000566882 SGSM2O43147 1006 aa12.36□□□□□ -0.43
CCNDBP1-210ENST00000566882 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
CCNDBP1-210ENST00000566882 FOXO4P98177 505 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms