RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ST5P78524 1137 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 RASSF7Q02833 373 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
UBR1-206ENST00000566493 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 CNBD1Q8NA66 436 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 ZNF652Q9Y2D9 606 aa15.84■□□□□ 0.13
UBR1-206ENST00000566493 CEP350Q5VT06 3117 aa15.83■□□□□ 0.13
UBR1-206ENST00000566493 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
UBR1-206ENST00000566493 CCDC24Q8N4L8 307 aa15.83■□□□□ 0.12
UBR1-206ENST00000566493 RBM46Q8TBY0 533 aaKnown RBP15.83■□□□□ 0.12
UBR1-206ENST00000566493 RRAGCQ9HB90 399 aa15.83■□□□□ 0.12
UBR1-206ENST00000566493 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
UBR1-206ENST00000566493 ANKRD31Q8N7Z5 1873 aa15.82■□□□□ 0.12
UBR1-206ENST00000566493 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
UBR1-206ENST00000566493 CLEC4GQ6UXB4 293 aa15.82■□□□□ 0.12
UBR1-206ENST00000566493 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
UBR1-206ENST00000566493 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
UBR1-206ENST00000566493 CCDC88AQ3V6T2 1871 aa15.81■□□□□ 0.12
UBR1-206ENST00000566493 PNISRQ8TF01 805 aaKnown RBP15.81■□□□□ 0.12
UBR1-206ENST00000566493 TNRC6CQ9HCJ0 1690 aaKnown RBP15.81■□□□□ 0.12
UBR1-206ENST00000566493 C21orf2O43822 256 aa15.8■□□□□ 0.12
UBR1-206ENST00000566493 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
UBR1-206ENST00000566493 CNKSR1Q969H4 720 aa15.8■□□□□ 0.12
UBR1-206ENST00000566493 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
UBR1-206ENST00000566493 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
UBR1-206ENST00000566493 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
UBR1-206ENST00000566493 FSTL1Q12841 308 aa15.79■□□□□ 0.12
UBR1-206ENST00000566493 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
UBR1-206ENST00000566493 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
UBR1-206ENST00000566493 NFKBIEO00221 500 aa15.78■□□□□ 0.12
UBR1-206ENST00000566493 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
UBR1-206ENST00000566493 STYK1Q6J9G0 422 aa15.78■□□□□ 0.12
UBR1-206ENST00000566493 MASTLQ96GX5 879 aa15.78■□□□□ 0.12
UBR1-206ENST00000566493 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 RGL2O15211 777 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 SRGNP10124 158 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 PRELPP51888 382 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
UBR1-206ENST00000566493 TPTE2Q6XPS3 522 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
UBR1-206ENST00000566493 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
UBR1-206ENST00000566493 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.11
UBR1-206ENST00000566493 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
UBR1-206ENST00000566493 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
UBR1-206ENST00000566493 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
UBR1-206ENST00000566493 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
UBR1-206ENST00000566493 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
UBR1-206ENST00000566493 ERFEQ4G0M1 354 aa15.75■□□□□ 0.11
UBR1-206ENST00000566493 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
UBR1-206ENST00000566493 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
UBR1-206ENST00000566493 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
UBR1-206ENST00000566493 FER1L6Q2WGJ9 1857 aa15.75■□□□□ 0.11
UBR1-206ENST00000566493 KDM3BQ7LBC6 1761 aa15.75■□□□□ 0.11
UBR1-206ENST00000566493 SLX4Q8IY92 1834 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 NPR1P16066 1061 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 RALBP1Q15311 655 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 DICER1Q9UPY3 1922 aaKnown RBP15.74■□□□□ 0.11
UBR1-206ENST00000566493 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
UBR1-206ENST00000566493 LTBP3Q9NS15 1303 aa15.73■□□□□ 0.11
UBR1-206ENST00000566493 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
UBR1-206ENST00000566493 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
UBR1-206ENST00000566493 THUMPD2Q9BTF0 503 aaKnown RBP15.73■□□□□ 0.11
UBR1-206ENST00000566493 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
UBR1-206ENST00000566493 HLFQ16534 295 aa15.72■□□□□ 0.11
UBR1-206ENST00000566493 DNAJC5GQ8N7S2 189 aa15.72■□□□□ 0.11
UBR1-206ENST00000566493 NYXQ9GZU5 481 aa15.72■□□□□ 0.11
UBR1-206ENST00000566493 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.11
UBR1-206ENST00000566493 MYL6BP14649 208 aa15.71■□□□□ 0.11
UBR1-206ENST00000566493 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
UBR1-206ENST00000566493 KLRG2A4D1S0 409 aaPredicted RBP15.7■□□□□ 0.1
UBR1-206ENST00000566493 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
UBR1-206ENST00000566493 RIPK4P57078 832 aa15.7■□□□□ 0.1
UBR1-206ENST00000566493 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
UBR1-206ENST00000566493 MAP3K15Q6ZN16 1313 aa15.69■□□□□ 0.1
UBR1-206ENST00000566493 NUP98P52948 1817 aa15.69■□□□□ 0.1
UBR1-206ENST00000566493 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
UBR1-206ENST00000566493 HTRA3P83110 453 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
UBR1-206ENST00000566493 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 TTLL7Q6ZT98 887 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 RTKN2Q8IZC4 609 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 KLRG1Q96E93 195 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
UBR1-206ENST00000566493 C7orf43Q8WVR3 580 aa15.67■□□□□ 0.1
UBR1-206ENST00000566493 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
UBR1-206ENST00000566493 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
UBR1-206ENST00000566493 POTECB2RU33 542 aa15.66■□□□□ 0.1
UBR1-206ENST00000566493 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
UBR1-206ENST00000566493 GPTP24298 496 aa15.66■□□□□ 0.1
UBR1-206ENST00000566493 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
UBR1-206ENST00000566493 FKBP4Q02790 459 aaKnown RBP eCLIP15.66■□□□□ 0.1
UBR1-206ENST00000566493 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
UBR1-206ENST00000566493 RPGRQ92834 1020 aaKnown RBP15.66■□□□□ 0.1
UBR1-206ENST00000566493 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
UBR1-206ENST00000566493 MYBBP1AQ9BQG0 1328 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms