RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 HLFQ16534 295 aa11.86□□□□□ -0.51
SMPD3-207ENST00000566466 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
SMPD3-207ENST00000566466 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
SMPD3-207ENST00000566466 GYS1P13807 737 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 RCAN3Q9UKA8 241 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 MAP3K15Q6ZN16 1313 aa11.85□□□□□ -0.51
SMPD3-207ENST00000566466 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
SMPD3-207ENST00000566466 DZIP3Q86Y13 1208 aaKnown RBP11.84□□□□□ -0.51
SMPD3-207ENST00000566466 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
SMPD3-207ENST00000566466 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
SMPD3-207ENST00000566466 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
SMPD3-207ENST00000566466 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
SMPD3-207ENST00000566466 UBN2Q6ZU65 1347 aa11.84□□□□□ -0.51
SMPD3-207ENST00000566466 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
SMPD3-207ENST00000566466 F6X3S4 739 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 TRIM27P14373 513 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 FKBP8Q14318 412 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 NOB1Q9ULX3 412 aaKnown RBP11.83□□□□□ -0.52
SMPD3-207ENST00000566466 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 ABCC4O15439 1325 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
SMPD3-207ENST00000566466 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 RGL2O15211 777 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 RLBP1P12271 317 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
SMPD3-207ENST00000566466 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
SMPD3-207ENST00000566466 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
SMPD3-207ENST00000566466 NUP98P52948 1817 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 DDR1Q08345 913 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
SMPD3-207ENST00000566466 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
SMPD3-207ENST00000566466 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 ISCA1Q9BUE6 129 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 PTPRCP08575 1304 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
SMPD3-207ENST00000566466 A0A087WZG4 1122 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 PLIN1O60240 522 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 TM4SF1P30408 202 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 NFIXQ14938 502 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
SMPD3-207ENST00000566466 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
SMPD3-207ENST00000566466 PTGER2P43116 358 aa11.79□□□□□ -0.52
SMPD3-207ENST00000566466 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
SMPD3-207ENST00000566466 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
SMPD3-207ENST00000566466 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
SMPD3-207ENST00000566466 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
SMPD3-207ENST00000566466 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
SMPD3-207ENST00000566466 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
SMPD3-207ENST00000566466 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
SMPD3-207ENST00000566466 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
SMPD3-207ENST00000566466 RFC4P35249 363 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
SMPD3-207ENST00000566466 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 DNAAF4Q8WXU2 420 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 CHMP4AQ9BY43 222 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
SMPD3-207ENST00000566466 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
SMPD3-207ENST00000566466 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 NTSR2O95665 410 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
SMPD3-207ENST00000566466 CASP7P55210 303 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 TRIM28Q13263 835 aaKnown RBP11.77□□□□□ -0.53
SMPD3-207ENST00000566466 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
SMPD3-207ENST00000566466 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 NLRP10Q86W26 655 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 MYD88Q99836 296 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 COL4A1P02462 1669 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.53
SMPD3-207ENST00000566466 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 SUSD4Q5VX71 490 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 SYNE4Q8N205 404 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
SMPD3-207ENST00000566466 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
SMPD3-207ENST00000566466 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
SMPD3-207ENST00000566466 ZPR1O75312 459 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 GPTP24298 496 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms